RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 HLA-DOBP13765 273 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 POLR2CP19387 275 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 KCNA5P22460 613 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 LMAN1P49257 510 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 ZBTB17Q13105 803 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 KEAP1Q14145 624 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 IRAK1BP1Q5VVH5 260 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 GARNL3Q5VVW2 1013 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 C9orf57Q5W0N0 161 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 KRT79Q5XKE5 535 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 ZNF324BQ6AW86 544 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 ZNF534Q76KX8 674 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 GCSAMQ8N6F7 178 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 RBMXL3Q8N7X1 1067 aaKnown RBP5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 LMO3Q8TAP4 145 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 TMCO6Q96DC7 493 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 DOCK7Q96N67 2140 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 C1QTNF4Q9BXJ3 329 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 SEMA6AQ9H2E6 1030 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 CD93Q9NPY3 652 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 NRBP1Q9UHY1 535 aa5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 RALYQ9UKM9 306 aaKnown RBP5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 TMEM184BQ9Y519 407 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-219ENST00000583294 A6NL46 340 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 CCKARP32238 428 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 CALD1Q05682 793 aaKnown RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 GTF2H2Q13888 395 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 ZNF234Q14588 700 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 C15orf59Q2T9L4 293 aaPredicted RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 ALS2CLQ60I27 953 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 TRNP1Q6NT89 227 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 GTF2H2CQ6P1K8 395 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 ZNF517Q6ZMY9 492 aaPredicted RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 INTS8Q75QN2 995 aaKnown RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 HAUS6Q7Z4H7 955 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 RBM23Q86U06 439 aaKnown RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 LDB1Q86U70 411 aaPredicted RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 MINDY1Q8N5J2 469 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 SYT2Q8N9I0 419 aaPredicted RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 AVL9Q8NBF6 648 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 TBC1D16Q8TBP0 767 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 PPP4R1Q8TF05 950 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 DACH2Q96NX9 599 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 MEIS3Q99687 375 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 SPATC1LQ9H0A9 340 aa5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 PPIL3Q9H2H8 161 aaKnown RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 RCC2Q9P258 522 aaKnown RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 LARSQ9P2J5 1176 aaKnown RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 PPIEQ9UNP9 301 aaKnown RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 ZNF644Q9H582 1327 aaPredicted RBP5.42□□□□□ -1.54
SMARCE1-219ENST00000583294 LOC100509620A0A075B734 347 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 IGHV4OR15-8A0A075B7B6 117 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 LOC102723996A0A087X1L8 192 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 GPR75-ASB3A0A0A6YYF3 556 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 hCG_1809904A0A1W2PP81 198 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 A0A1W2PPE2 198 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 A0A1W2PR64 198 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 SYNDIG1LA6NDD5 238 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 OR5K3A6NET4 321 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 ZNHIT1O43257 154 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 LDB3O75112 727 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 DNTTP04053 509 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 CDH1P12830 882 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 MATR3P43243 847 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 LIG4P49917 911 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 CTSCP53634 463 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 PLIN5Q00G26 463 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 EEF1A2Q05639 463 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 RUNX1T1Q06455 604 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 TMEM266Q2M3C6 531 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 OR7E24Q6IFN5 339 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 NAA16Q6N069 864 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 ASB18Q6ZVZ8 466 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 PRPF39Q86UA1 669 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 KMT5CQ86Y97 462 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 C1orf52Q8N6N3 182 aaKnown RBP5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 KCTD6Q8NC69 237 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 KCNH5Q8NCM2 988 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 OR52I2Q8NH67 350 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 PTPMT1Q8WUK0 201 aaPredicted RBP5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 PTERQ96BW5 349 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 IGSF21Q96ID5 467 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 SYT17Q9BSW7 474 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 SLCO5A1Q9H2Y9 848 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 KCNK15Q9H427 330 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 TCP11L1Q9NUJ3 509 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 MORF4L1Q9UBU8 362 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 AMACRQ9UHK6 382 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 POU2F3Q9UKI9 436 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 CGNL1Q0VF96 1302 aa5.41□□□□□ -1.54
SMARCE1-219ENST00000583294 NDUFS4O43181 175 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 TPOP07202 933 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 IL11P20809 199 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 USP8P40818 1118 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 ARSEP51690 589 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 SNRPEP62304 92 aaKnown RBP5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 COASYQ13057 564 aa5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 PRPF4BQ13523 1007 aaKnown RBP5.4□□□□□ -1.54
SMARCE1-219ENST00000583294 BAATQ14032 418 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms