RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 PAPOLAP51003 745 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 CLCNKAP51800 687 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 MARSP56192 900 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 WDR4P57081 412 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 GSDMDP57764 484 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 AP1S1P61966 158 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 PTSQ03393 145 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 TRAF2Q12933 501 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 ABRQ12979 859 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 CDC16Q13042 620 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 GPR18Q14330 331 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 NCF4Q15080 339 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 ZNF658Q5TYW1 1059 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 TRIM65Q6PJ69 517 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 IGFL2Q6UWQ7 119 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 ARHGAP36Q6ZRI8 547 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 NLRP8Q86W28 1048 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 PRIMA1Q86XR5 153 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 RAB43Q86YS6 212 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 D2HGDHQ8N465 521 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 AOPEPQ8N6M6 819 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 PAF1Q8N7H5 531 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 AVL9Q8NBF6 648 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 EXD1Q8NHP7 514 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 JOSD2Q8TAC2 188 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 GPT2Q8TD30 523 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 RXFP2Q8WXD0 754 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 TM9SF4Q92544 642 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 UBXN4Q92575 508 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 CENPIQ92674 756 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 NTAN1Q96AB6 310 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 SCRN2Q96FV2 425 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 ZDHHC12Q96GR4 267 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 MCCC1Q96RQ3 725 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 WDR24Q96S15 920 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 MAP3K3Q99759 626 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 TMEM121Q9BTD3 319 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 RIOK2Q9BVS4 552 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 CXXC4Q9H2H0 198 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 SLC40A1Q9NP59 571 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 KCND1Q9NSA2 647 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 OLAHQ9NV23 265 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 PCMTD2Q9NV79 361 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 SUCOQ9UBS9 1254 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 SLC23A2Q9UGH3 650 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 RPH3AQ9Y2J0 694 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 PCDHGB6Q9Y5F9 930 aa7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 FBN1P35555 2871 aaKnown RBP7.51□□□□□ -1.21
SMARCE1-217ENST00000580654 TRGV8A0A0C4DH27 118 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 C2CD4BA6NLJ0 364 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 OR52A4PA6NMU1 304 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 FADS2P1A8MWK0 482 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 KIAA1324LA8MWY0 1029 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 DDX3YO15523 660 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 NUAK1O60285 661 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 LCA5LO95447 670 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 NEFLP07196 543 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 KLK3P07288 261 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 PBX1P40424 430 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 CA7P43166 264 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 FOXL2P58012 376 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 TUBB4BP68371 445 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 SRSF11Q05519 484 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 PNOCQ13519 176 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 TUBB2AQ13885 445 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 ZNF169Q14929 603 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 PTCHD3Q3KNS1 767 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 PLA2G4EQ3MJ16 856 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 ZNF789Q5FWF6 425 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 B3GNTL1Q67FW5 361 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 LRRC66Q68CR7 880 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 XKRXQ6PP77 449 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 RPTNQ6XPR3 784 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 STRADAQ7RTN6 431 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 CEP97Q8IW35 865 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 ARHGAP12Q8IWW6 846 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 SYTL1Q8IYJ3 562 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 PGBD5Q8N414 524 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 SVOPQ8N4V2 548 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 CLEC1AQ8NC01 280 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 TMEM35BQ8NCS4 154 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 DNAJB14Q8TBM8 379 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 FAM172AQ8WUF8 416 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 PIH1D2Q8WWB5 315 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 MTFMTQ96DP5 389 aaKnown RBP7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 FER1L6-AS2Q96M78 137 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 PCMTD1Q96MG8 357 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 AGAP3Q96P47 875 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 TAAR6Q96RI8 345 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 SPOCK3Q9BQ16 436 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 TREX2Q9BQ50 279 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 CRACR2AQ9BSW2 395 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 TUBB2BQ9BVA1 445 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 CINPQ9BW66 212 aaPredicted RBP7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 ENKD1Q9H0I2 346 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 GOLPH3LQ9H4A5 285 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 RMI1Q9H9A7 625 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 KLC4Q9NSK0 619 aa7.5□□□□□ -1.21
SMARCE1-217ENST00000580654 PPIL1Q9Y3C6 166 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms