RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 ARNT2Q9HBZ2 717 aa10.73□□□□□ -0.69
NDEL1-208ENST00000580237 HOMER3Q9NSC5 361 aa10.73□□□□□ -0.69
NDEL1-208ENST00000580237 CPNE7Q9UBL6 633 aa10.73□□□□□ -0.69
NDEL1-208ENST00000580237 PISDQ9UG56 409 aa10.73□□□□□ -0.69
NDEL1-208ENST00000580237 TMPRSS11EQ9UL52 423 aa10.73□□□□□ -0.69
NDEL1-208ENST00000580237 JRKLQ9Y4A0 524 aa10.73□□□□□ -0.69
NDEL1-208ENST00000580237 LOXL2Q9Y4K0 774 aa10.73□□□□□ -0.69
NDEL1-208ENST00000580237 PCDHGA8Q9Y5G5 932 aa10.73□□□□□ -0.69
NDEL1-208ENST00000580237 FAM208BQ5VWN6 2430 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 IGHV1OR21-1A0A087WYE8 117 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 HEATR9A2RTY3 570 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 A6NCN8 305 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 GAPDHSO14556 408 aaPredicted RBP10.72□□□□□ -0.69
NDEL1-208ENST00000580237 B4GAT1O43505 415 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 LDB2O43679 373 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 TLX3O43711 291 aaPredicted RBP10.72□□□□□ -0.69
NDEL1-208ENST00000580237 DXOO77932 396 aaKnown RBP10.72□□□□□ -0.69
NDEL1-208ENST00000580237 ITGA2BP08514 1039 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 HGFP14210 728 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 ETS1P14921 441 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 MLLT3P42568 568 aaPredicted RBP10.72□□□□□ -0.69
NDEL1-208ENST00000580237 CLCNKAP51800 687 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 CTSCP53634 463 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 DRG2P55039 364 aaKnown RBP10.72□□□□□ -0.69
NDEL1-208ENST00000580237 ERVPABLB-1P60509 514 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 SEMA5AQ13591 1074 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 LAMB3Q13751 1172 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 IYDQ6PHW0 289 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 TMEM220Q6QAJ8 160 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 C19orf48Q6RUI8 117 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 TAS2R42Q7RTR8 314 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 PRUNE1Q86TP1 453 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 NXPE1Q8N323 547 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 ZNF248Q8NDW4 579 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 PPHLN1Q8NEY8 458 aaKnown RBP10.72□□□□□ -0.69
NDEL1-208ENST00000580237 HNRNPLLQ8WVV9 542 aaKnown RBP10.72□□□□□ -0.69
NDEL1-208ENST00000580237 TMEM159Q96B96 161 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 CCDC74BQ96LY2 380 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 NAP1L3Q99457 506 aaPredicted RBP10.72□□□□□ -0.69
NDEL1-208ENST00000580237 COPS8Q99627 209 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 DPYSL5Q9BPU6 564 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 FAM96AQ9H5X1 160 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 VPS37BQ9H9H4 285 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 POT1Q9NUX5 634 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 TRMT1Q9NXH9 659 aaKnown RBP10.72□□□□□ -0.69
NDEL1-208ENST00000580237 SLC23A2Q9UGH3 650 aa10.72□□□□□ -0.69
NDEL1-208ENST00000580237 GOLGA6L10A0A0M3HER8 536 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 PMS2P1A4D2B8 440 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 LILRA5A6NI73 299 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 PGRMC1O00264 195 aaKnown RBP10.71□□□□□ -0.69
NDEL1-208ENST00000580237 KCNJ13O60928 360 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 POP7O75817 140 aaKnown RBP10.71□□□□□ -0.69
NDEL1-208ENST00000580237 SLC35G4P0C7Q5 338 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 ZSCAN5DPP0CG00 497 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 CD1CP29017 333 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 CSF2RBP32927 897 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 VPS41P49754 854 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 MAPK10P53779 464 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 EPHA4P54764 986 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 CACNG1Q06432 222 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 NFE2L1Q14494 772 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 PLCL1Q15111 1095 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 SIX1Q15475 284 aaPredicted RBP10.71□□□□□ -0.69
NDEL1-208ENST00000580237 SKIDA1Q1XH10 827 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 GPR33Q49SQ1 333 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 CCDC38Q502W7 563 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 SNAP47Q5SQN1 464 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.71□□□□□ -0.69
NDEL1-208ENST00000580237 DRICH1Q6PGQ1 229 aaPredicted RBP10.71□□□□□ -0.69
NDEL1-208ENST00000580237 C4orf22Q6V702 233 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 SLITRK4Q8IW52 837 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 SLC35F6Q8N357 371 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 BEND7Q8N7W2 519 aaPredicted RBP10.71□□□□□ -0.69
NDEL1-208ENST00000580237 RCBTB1Q8NDN9 531 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 OR4D9Q8NGE8 314 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 STYXQ8WUJ0 223 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 HEXDCQ8WVB3 486 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 KCNE4Q8WWG9 221 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 AHCTF1Q8WYP5 2266 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 SGF29Q96ES7 293 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 PBKQ96KB5 322 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 C19orf43Q9BQ61 176 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 KCNF1Q9H3M0 494 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 SEMA6CQ9H3T2 930 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 EPB41L1Q9H4G0 881 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 ASCL3Q9NQ33 180 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 IMP3Q9NV31 184 aaKnown RBP10.71□□□□□ -0.69
NDEL1-208ENST00000580237 NLE1Q9NVX2 485 aaPredicted RBP10.71□□□□□ -0.69
NDEL1-208ENST00000580237 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.71□□□□□ -0.69
NDEL1-208ENST00000580237 KLHL3Q9UH77 587 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 PSMD13Q9UNM6 376 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 LHX6Q9UPM6 363 aa10.71□□□□□ -0.69
NDEL1-208ENST00000580237 PTPRQQ9UMZ3 2332 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 A0A087WV48 116 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 IGHV5-10-1A0A0J9YXX1 117 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 A0A1W2PNU3 283 aaPredicted RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 KLHL33A6NCF5 533 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 OR52A4PA6NMU1 304 aa10.7□□□□□ -0.7
NDEL1-208ENST00000580237 HGSO14964 777 aaPredicted RBP10.7□□□□□ -0.7
NDEL1-208ENST00000580237 SUN1O94901 812 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms