RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 BPIP17213 487 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 NELFEP18615 380 aaKnown RBP18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 KDELR1P24390 212 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 RPL10P27635 214 aaKnown RBP18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 PBX1P40424 430 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 CDK18Q07002 472 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 DNASE1L3Q13609 305 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 SLC14A2Q15849 920 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 FAM92BQ6ZTR7 304 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 NT5DC3Q86UY8 548 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 PLD5Q8N7P1 536 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 TADA1Q96BN2 335 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 CXorf40BQ96DE9 158 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 IQCDQ96DY2 449 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 VPS35Q96QK1 796 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 SRPK1Q96SB4 655 aaKnown RBP18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 SLC25A51Q9H1U9 297 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 SEMA5BQ9P283 1151 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 TLK1Q9UKI8 766 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 CAPN11Q9UMQ6 739 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 NENFQ9UMX5 172 aa18.86■□□□□ 0.61
CDKN2A-213ENST00000579122 PIPSLA2A3N6 862 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 ZNF487B1APH4 448 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 C21orf140B9A014 251 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 MTX2O75431 263 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 SLC4A1P02730 911 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 TPM3P06753 285 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 VCLP18206 1134 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 MLLT10P55197 1068 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 KHDC1Q4VXA5 237 aaKnown RBP18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 ZFYVE27Q5T4F4 411 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 IRGCQ6NXR0 463 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 C11orf96Q7Z7L8 435 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 TMEM135Q86UB9 458 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 APLFQ8IW19 511 aaPredicted RBP18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 RAPGEF5Q92565 580 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 FCRL4Q96PJ5 515 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 CEP41Q9BYV8 373 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 BRD8Q9H0E9 1235 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 PDE7BQ9NP56 450 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 LHX9Q9NQ69 397 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 HEY1Q9Y5J3 304 aa18.85■□□□□ 0.61
CDKN2A-213ENST00000579122 KCNJ13O60928 360 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 H2AFZP0C0S5 128 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 CASP14P31944 242 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 DRG2P55039 364 aaKnown RBP18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 AP1B1Q10567 949 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 PCSK7Q16549 785 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 SLC9A4Q6AI14 798 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 H2AFVQ71UI9 128 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 CT55Q8WUE5 264 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 CPLX3Q8WVH0 158 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 SEC14L1Q92503 715 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 UBXN4Q92575 508 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 ANP32BQ92688 251 aaKnown RBP18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 SLC41A2Q96JW4 573 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 AGAP3Q96P47 875 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 TMPRSS11EQ9UL52 423 aa18.84■□□□□ 0.61
CDKN2A-213ENST00000579122 TIAF1O95411 115 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 HALP42357 657 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 TMEM115Q12893 351 aaPredicted RBP18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 PDK1Q15118 436 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 ATP13A5Q4VNC0 1218 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 CCDC70Q6NSX1 233 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 BPHLQ86WA6 291 aaPredicted RBP18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 VSIG1Q86XK7 387 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 TRAPPC5Q8IUR0 188 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 LURAP1LQ8IV03 231 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 SIDT2Q8NBJ9 832 aaKnown RBP18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 BRSK1Q8TDC3 778 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 CTNNBL1Q8WYA6 563 aaPredicted RBP18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 MRFAP1L1Q96HT8 127 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 TRIM10Q9UDY6 481 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 RARRES3Q9UL19 164 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 WDR37Q9Y2I8 494 aa18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 LUC7L2Q9Y383 392 aaKnown RBP18.83■□□□□ 0.6
CDKN2A-213ENST00000579122 IGHV5-51A0A0C4DH38 117 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 BLACEA4D250 179 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 PPP1R12AO14974 1030 aaPredicted RBP18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 NDST3O95803 873 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 FECHP22830 423 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 TUBB3Q13509 450 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 SEMA5AQ13591 1074 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 GTF2H3Q13889 308 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 FAM182AQ5T1J6 154 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 KLHL35Q6PF15 583 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 DTX3LQ8TDB6 740 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 OLFM3Q96PB7 478 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 GPR87Q9BY21 358 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 ACTL8Q9H568 366 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 SPO11Q9Y5K1 396 aa18.82■□□□□ 0.6
CDKN2A-213ENST00000579122 SPTAN1Q13813 2472 aaKnown RBP18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 LRRD1A4D1F6 860 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 C3orf70A6NLC5 250 aaPredicted RBP18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 APOL1O14791 398 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 AURKAO14965 403 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 PDGFAP04085 211 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 FOLR1P15328 257 aa18.81■□□□□ 0.6
CDKN2A-213ENST00000579122 ZFXP17010 805 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms