RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 GDAP1Q8TB36 358 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 MZB1Q8WU39 189 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 SREK1Q8WXA9 508 aaKnown RBP10.1□□□□□ -0.79
SS18-210ENST00000578700 EXOC2Q96KP1 924 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 MAGEB18Q96M61 343 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 ZNF578Q96N58 590 aaPredicted RBP10.1□□□□□ -0.79
SS18-210ENST00000578700 KLF6Q99612 283 aaPredicted RBP10.1□□□□□ -0.79
SS18-210ENST00000578700 RBBP8Q99708 897 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 TDRD1Q9BXT4 1180 aaKnown RBP10.1□□□□□ -0.79
SS18-210ENST00000578700 CEP44Q9C0F1 390 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 FAM107BQ9H098 131 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 CCDC134Q9H6E4 229 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 ATP13A3Q9H7F0 1226 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 DCDC2Q9UHG0 476 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 TLK1Q9UKI8 766 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 GRID1Q9ULK0 1009 aa10.1□□□□□ -0.79
SS18-210ENST00000578700 RPL26L1Q9UNX3 145 aaKnown RBP10.1□□□□□ -0.79
SS18-210ENST00000578700 FCF1Q9Y324 198 aaKnown RBP10.1□□□□□ -0.79
SS18-210ENST00000578700 UBR5O95071 2799 aaPredicted RBP10.09□□□□□ -0.79
SS18-210ENST00000578700 FLNCQ14315 2725 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 UGT1A9O60656 530 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 SOCS5O75159 536 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 GLRA3O75311 464 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 CSO75390 466 aaKnown RBP10.09□□□□□ -0.79
SS18-210ENST00000578700 THEGLP0DJG4 465 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 CREB1P16220 341 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 CR2P20023 1033 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 NFKBIAP25963 317 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 SERPINA4P29622 427 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 DRD3P35462 400 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 UCNP55089 124 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 PPARDQ03181 441 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 VAC14Q08AM6 782 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 GRM3Q14832 879 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 TAF1AQ15573 450 aaPredicted RBP10.09□□□□□ -0.79
SS18-210ENST00000578700 ZNF542PQ5EBM4 170 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 ARMC12Q5T9G4 340 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 GKAP1Q5VSY0 366 aaPredicted RBP10.09□□□□□ -0.79
SS18-210ENST00000578700 KIAA1614Q5VZ46 1190 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 MRNIPQ6NTE8 343 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 ESRP1Q6NXG1 681 aaKnown RBP10.09□□□□□ -0.79
SS18-210ENST00000578700 LVRNQ6Q4G3 990 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 MICALCLQ6ZW33 695 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 GLT6D1Q7Z4J2 308 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 LSMEM2Q8N112 164 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 KDM1BQ8NB78 822 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 TCP10LQ8TDR4 215 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 LRRC8CQ8TDW0 803 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 CKAP2Q8WWK9 683 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 SPOCK2Q92563 424 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 ISG20Q96AZ6 181 aaKnown RBP10.09□□□□□ -0.79
SS18-210ENST00000578700 ALG14Q96F25 216 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 DEPDC7Q96QD5 511 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 CCT8L2Q96SF2 557 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 SLC13A1Q9BZW2 595 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 RHOJQ9H4E5 214 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 UGT1A7Q9HAW7 530 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 UGT1A10Q9HAW8 530 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 UGT1A8Q9HAW9 530 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 FZD3Q9NPG1 666 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 TREX1Q9NSU2 369 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 PCMTD2Q9NV79 361 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 MKS1Q9NXB0 559 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 LHX3Q9UBR4 397 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 SARDHQ9UL12 918 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 RIMKLBQ9ULI2 386 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 CHKBQ9Y259 395 aa10.09□□□□□ -0.79
SS18-210ENST00000578700 BSNQ9UPA5 3926 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 A0A1W2PQ67 120 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 MROH6A6NGR9 719 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 PRAMEF26H0Y7S4 382 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 TPP1O14773 563 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 LATO43561 262 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 RNGTTO60942 597 aaKnown RBP10.08□□□□□ -0.8
SS18-210ENST00000578700 RFPL1O75677 317 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 GSRP00390 522 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 ALPPL2P10696 532 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 C6P13671 934 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 CRHR1P34998 444 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 CCNFP41002 786 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 RGRP47804 291 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 CD151P48509 253 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 KPNA2P52292 529 aaKnown RBP10.08□□□□□ -0.8
SS18-210ENST00000578700 SEC24CP53992 1094 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 CNTN1Q12860 1018 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 OVGP1Q12889 678 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 ELAVL3Q14576 367 aaKnown RBP10.08□□□□□ -0.8
SS18-210ENST00000578700 INSCQ1MX18 579 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 SETMARQ53H47 684 aaPredicted RBP10.08□□□□□ -0.8
SS18-210ENST00000578700 C3orf38Q5JPI3 329 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 FAM46CQ5VWP2 391 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 ZNF470Q6ECI4 717 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 KYAT3Q6YP21 454 aaKnown RBP10.08□□□□□ -0.8
SS18-210ENST00000578700 RAPH1Q70E73 1250 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 PRICKLE2Q7Z3G6 844 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 LCA5Q86VQ0 697 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 IQCHQ86VS3 1027 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 CNTN4Q8IWV2 1026 aa10.08□□□□□ -0.8
SS18-210ENST00000578700 PCDH20Q8N6Y1 951 aaKnown RBP10.08□□□□□ -0.8
SS18-210ENST00000578700 ANKS4BQ8N8V4 417 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms