RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 CA5AP35218 305 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 CD151P48509 253 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 POLD2P49005 469 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 SPEM2Q0P670 501 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 RPA4Q13156 261 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 SEMA3AQ14563 771 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 INAVAQ3KP66 663 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 FAM153CQ494X1 144 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 DOK6Q6PKX4 331 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 TMEM220Q6QAJ8 160 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 LAYNQ6UX15 382 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 WASH2PQ6VEQ5 465 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 AMZ2Q86W34 360 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 GKN2Q86XP6 184 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 TRAPPC5Q8IUR0 188 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 HID1Q8IV36 788 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 BEND7Q8N7W2 519 aaPredicted RBP13.67□□□□□ -0.22
LINC01543-201ENST00000578367 OR2L2Q8NH16 312 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 FBF1Q8TES7 1133 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 KCNJ9Q92806 393 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 TSACCQ96A04 125 aaPredicted RBP13.67□□□□□ -0.22
LINC01543-201ENST00000578367 WASH6PQ9NQA3 447 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 LATS2Q9NRM7 1088 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 ZNHIT2Q9UHR6 403 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 CACNA1EQ15878 2313 aa13.67□□□□□ -0.22
LINC01543-201ENST00000578367 LNP1A1A4G5 178 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 MGAT4DA6NG13 374 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 LMO7DNF2Z398 122 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 LIN7AO14910 233 aaPredicted RBP13.66□□□□□ -0.22
LINC01543-201ENST00000578367 SCAMP1O15126 338 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 SGTAO43765 313 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 MTX2O75431 263 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 AHSGP02765 367 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 FUCA1P04066 466 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 PRSS56P0CW18 603 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 PKMP14618 531 aaKnown RBP13.66□□□□□ -0.22
LINC01543-201ENST00000578367 SLC2A4P14672 509 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 GP5P40197 560 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 SKIV2L2P42285 1042 aaKnown RBP13.66□□□□□ -0.22
LINC01543-201ENST00000578367 GNPDA1P46926 289 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 CTBP1Q13363 440 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 GRTP1Q5TC63 336 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 PTRHD1Q6GMV3 140 aaKnown RBP13.66□□□□□ -0.22
LINC01543-201ENST00000578367 DBX2Q6ZNG2 339 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 PRR23CQ6ZRP0 262 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 C11orf96Q7Z7L8 435 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 ZNF547Q8IVP9 402 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 DENND6AQ8IWF6 608 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 UNC5BQ8IZJ1 945 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 MINDY1Q8N5J2 469 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 HM13Q8TCT9 377 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 HNRNPLLQ8WVV9 542 aaKnown RBP13.66□□□□□ -0.22
LINC01543-201ENST00000578367 SGF29Q96ES7 293 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 BIRC8Q96P09 236 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 CCM2Q9BSQ5 444 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 MCMBPQ9BTE3 642 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 DUSP23Q9BVJ7 150 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 BOCQ9BWV1 1114 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 RHOJQ9H4E5 214 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 NCKIPSDQ9NZQ3 722 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 KLF15Q9UIH9 416 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 RABGEF1Q9UJ41 708 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 MOSPD1Q9UJG1 213 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 PCOLCE2Q9UKZ9 415 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 ACSL5Q9ULC5 683 aa13.66□□□□□ -0.22
LINC01543-201ENST00000578367 TNRC6BQ9UPQ9 1833 aaKnown RBP13.66□□□□□ -0.22
LINC01543-201ENST00000578367 OTOGLQ3ZCN5 2332 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 ZNF106Q9H2Y7 1883 aaKnown RBP13.65□□□□□ -0.22
LINC01543-201ENST00000578367 SCN8AQ9UQD0 1980 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 LRRK1Q38SD2 2015 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 UBA6A0AVT1 1052 aaPredicted RBP13.65□□□□□ -0.22
LINC01543-201ENST00000578367 PRR19A6NJB7 356 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 AQP9O43315 295 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 OR1I1O60431 355 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 POP7O75817 140 aaKnown RBP13.65□□□□□ -0.22
LINC01543-201ENST00000578367 ACSL3O95573 720 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 ALPPL2P10696 532 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 DGKAP23743 735 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 CNTFP26441 200 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 SPRP35270 261 aaPredicted RBP13.65□□□□□ -0.22
LINC01543-201ENST00000578367 CTSCP53634 463 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 LIMK1P53667 647 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 ARHGAP8P85298 464 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 KBTBD12Q3ZCT8 623 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 PRRT3Q5FWE3 981 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 AGAP9Q5VTM2 703 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 UGT3A1Q6NUS8 523 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 KDM7AQ6ZMT4 941 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 CCDC91Q7Z6B0 441 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 STRA8Q7Z7C7 330 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 AVL9Q8NBF6 648 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 ZNF548Q8NEK5 533 aaPredicted RBP13.65□□□□□ -0.22
LINC01543-201ENST00000578367 SAP25Q8TEE9 199 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 LRRC61Q9BV99 259 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 TMEM168Q9H0V1 697 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 TMEM9BQ9NQ34 198 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 MRPL40Q9NQ50 206 aaKnown RBP13.65□□□□□ -0.22
LINC01543-201ENST00000578367 TM7SF3Q9NS93 570 aa13.65□□□□□ -0.22
LINC01543-201ENST00000578367 SPATS2LQ9NUQ6 558 aaKnown RBP13.65□□□□□ -0.22
LINC01543-201ENST00000578367 IL1RAPL1Q9NZN1 696 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms