RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 LIPMQ5VYY2 423 aa18.32■□□□□ 0.52
PRKCA-203ENST00000578063 OTOAQ7RTW8 1153 aa18.32■□□□□ 0.52
PRKCA-203ENST00000578063 SPNS2Q8IVW8 549 aa18.32■□□□□ 0.52
PRKCA-203ENST00000578063 OR14C36Q8NHC7 312 aa18.32■□□□□ 0.52
PRKCA-203ENST00000578063 KIAA1191Q96A73 305 aa18.32■□□□□ 0.52
PRKCA-203ENST00000578063 PTERQ96BW5 349 aa18.32■□□□□ 0.52
PRKCA-203ENST00000578063 SHDQ96IW2 340 aa18.32■□□□□ 0.52
PRKCA-203ENST00000578063 C7orf26Q96N11 449 aa18.32■□□□□ 0.52
PRKCA-203ENST00000578063 PREBQ9HCU5 417 aa18.32■□□□□ 0.52
PRKCA-203ENST00000578063 TCRBV21S2A2A0A5A6 115 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 CHURC1-FNTBB4DL54 471 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 SNNO75324 88 aaPredicted RBP18.31■□□□□ 0.52
PRKCA-203ENST00000578063 MTX2O75431 263 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 ITGB6P18564 788 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 NDUFV2P19404 249 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 DGKAP23743 735 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 KIAA1324Q6UXG2 1013 aaKnown RBP18.31■□□□□ 0.52
PRKCA-203ENST00000578063 ZCCHC23Q6ZST2 131 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 ZNF687Q8N1G0 1237 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 OR6Y1Q8NGX8 325 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 STAG3L4Q8TBR4 150 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 EEF1AKMT1Q8WVE0 214 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 THAP1Q9NVV9 213 aa18.31■□□□□ 0.52
PRKCA-203ENST00000578063 CNOT6Q9ULM6 557 aaKnown RBP18.31■□□□□ 0.52
PRKCA-203ENST00000578063 EIF3FO00303 357 aaPredicted RBP18.3■□□□□ 0.52
PRKCA-203ENST00000578063 KPNA5O15131 536 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 INPP4BO15327 924 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 DLX3O60479 287 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 KERAO60938 352 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 FTH1P02794 183 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 CBSLP0DN79 551 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 CBSP35520 551 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 MAP7D1Q3KQU3 841 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 KHDC1Q4VXA5 237 aaKnown RBP18.3■□□□□ 0.52
PRKCA-203ENST00000578063 SEL1L3Q68CR1 1132 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 NEK5Q6P3R8 708 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 ADAMTSL4Q6UY14 1074 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 Q6ZS52 159 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 DET1Q7L5Y6 550 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 PIGWQ7Z7B1 504 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 SLC22A9Q8IVM8 553 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 NAT14Q8WUY8 206 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 SGF29Q96ES7 293 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 KDM4CQ9H3R0 1056 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 POLMQ9NP87 494 aaPredicted RBP18.3■□□□□ 0.52
PRKCA-203ENST00000578063 THEGQ9P2T0 379 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 FBXL21Q9UKT6 434 aa18.3■□□□□ 0.52
PRKCA-203ENST00000578063 TMEM114B3SHH9 223 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 K7ESM1 405 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 BTN3A1O00481 513 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 SMIM24O75264 130 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 TARSP26639 723 aaKnown RBP18.29■□□□□ 0.52
PRKCA-203ENST00000578063 TEAD1P28347 426 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 DGKEP52429 567 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 STARD6P59095 220 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 DNAJB13P59910 316 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 OCRLQ01968 901 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 TMEM115Q12893 351 aaPredicted RBP18.29■□□□□ 0.52
PRKCA-203ENST00000578063 OR4D1Q15615 310 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 MYO1HQ8N1T3 1032 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 PELI3Q8N2H9 469 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 ATOH8Q96SQ7 321 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 ELAC2Q9BQ52 826 aaKnown RBP18.29■□□□□ 0.52
PRKCA-203ENST00000578063 C1QTNF7Q9BXJ2 289 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 EPHX3Q9H6B9 360 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 ZFR2Q9UPR6 939 aaKnown RBP18.29■□□□□ 0.52
PRKCA-203ENST00000578063 C19orf67A6NJJ6 358 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 SYCE1LA8MT33 242 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 SNX3O60493 162 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 TPBGLP0DKB5 382 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 ENO3P13929 434 aaPredicted RBP18.29■□□□□ 0.52
PRKCA-203ENST00000578063 GABRG2P18507 467 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 NFKB2Q00653 900 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 TSNQ15631 228 aaKnown RBP18.29■□□□□ 0.52
PRKCA-203ENST00000578063 TMEM259Q4ZIN3 620 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 CES4AQ5XG92 561 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 SYT13Q7L8C5 426 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 SPATA21Q7Z572 469 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 HORMAD1Q86X24 394 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 C1QTNF2Q9BXJ5 285 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 LMAN1LQ9HAT1 526 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 LTB4R2Q9NPC1 389 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 RNF112Q9ULX5 631 aa18.29■□□□□ 0.52
PRKCA-203ENST00000578063 LRRK1Q38SD2 2015 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 A0A1W2PQU0 124 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 KANSL1LA0AUZ9 987 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 NPEPPSL1A6NEC2 478 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 A8MT66 165 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 SGTAO43765 313 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 RNGTTO60942 597 aaKnown RBP18.28■□□□□ 0.52
PRKCA-203ENST00000578063 ATG13O75143 517 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 IPO13O94829 963 aaKnown RBP18.28■□□□□ 0.52
PRKCA-203ENST00000578063 TGDSO95455 350 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 TROVE2P10155 538 aaKnown RBP eCLIP18.28■□□□□ 0.52
PRKCA-203ENST00000578063 AOAHP28039 575 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 CCR7P32248 378 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 SLC1A6P48664 564 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 PRLHRP49683 370 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 SGCGQ13326 291 aa18.28■□□□□ 0.52
PRKCA-203ENST00000578063 GTF2H3Q13889 308 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms