RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 CA5AP35218 305 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 TTPAP49638 278 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CRADDP78560 199 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 SHC2P98077 582 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CBLBQ13191 982 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 HLTFQ14527 1009 aaKnown RBP eCLIP13.68□□□□□ -0.226e-6■■■■□ 22
SNORD3B-1-201ENST00000577988 KIR2DS5Q14953 304 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 DNAJC21Q5F1R6 531 aaKnown RBP13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 AGAP9Q5VTM2 703 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 KIAA0930Q6ICG6 404 aaPredicted RBP13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 HIBCHQ6NVY1 386 aaPredicted RBP13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CASC4Q6P4E1 433 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CRTC3Q6UUV7 619 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 ABRAXAS1Q6UWZ7 409 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 PACS1Q6VY07 963 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 EFL1Q7Z2Z2 1120 aaKnown RBP13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 C11orf96Q7Z7L8 435 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 TMEM135Q86UB9 458 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 TMPRSS12Q86WS5 348 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CCNJLQ8IV13 435 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 PIANPQ8IYJ0 282 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 NAGSQ8N159 534 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 BEND7Q8N7W2 519 aaPredicted RBP13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 KYQ8NBH2 561 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 IFI44Q8TCB0 444 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 ZNF592Q92610 1267 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 SH3KBP1Q96B97 665 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 LRRC39Q96DD0 335 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 SGF29Q96ES7 293 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 SIGLEC10Q96LC7 697 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 TCF12Q99081 682 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 ERP44Q9BS26 406 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 FAM96AQ9H5X1 160 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 VPS37BQ9H9H4 285 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 SIRPGQ9P1W8 387 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 KCNK6Q9Y257 313 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 PRKAB1Q9Y478 270 aa13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 PCYT1BQ9Y5K3 369 aaPredicted RBP13.68□□□□□ -0.22
SNORD3B-1-201ENST00000577988 PTPRBP23467 1997 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 DCHS1Q96JQ0 3298 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 FAM221BA6H8Z2 402 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 B4DGG1 531 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 GOLGA8MH3BSY2 632 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CD3EAPO15446 510 aaKnown RBP13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 AVILO75366 819 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 USP1O94782 785 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 SEC31AO94979 1220 aaKnown RBP13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 TTC4O95801 387 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 GPR3P46089 330 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 FASLGP48023 281 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 PRLHRP49683 370 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CDKN1CP49918 316 aaPredicted RBP13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CTSCP53634 463 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 TERF1P54274 439 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 B4GALNT1Q00973 533 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 BIRC2Q13490 618 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 TCEA2Q15560 299 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 SMAD1Q15797 465 aaKnown RBP13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 DBN1Q16643 649 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CLPPQ16740 277 aaPredicted RBP13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 FNBP1LQ5T0N5 605 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 MRNIPQ6NTE8 343 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 GUSBP11Q6P575 273 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 IYDQ6PHW0 289 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 TMPRSS7Q7RTY8 843 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 SDCCAG8Q86SQ7 713 aaPredicted RBP13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 LMNTD2Q8IXW0 634 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 PDIK1LQ8N165 341 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 SFRP1Q8N474 314 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 ARL14Q8N4G2 192 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 PNPLA1Q8N8W4 532 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 GPR150Q8NGU9 434 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 OR2L2Q8NH16 312 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 MAPK15Q8TD08 544 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 GRAMD1AQ96CP6 724 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 MFSD3Q96ES6 412 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 TRIM51Q9BSJ1 452 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 RAB17Q9H0T7 212 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 ABCG4Q9H172 646 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 STN1Q9H668 368 aaKnown RBP13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CATSPERZQ9NTU4 200 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 WHRNQ9P202 907 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 SLC23A2Q9UGH3 650 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 ACSL5Q9ULC5 683 aa13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 UTP11Q9Y3A2 253 aaKnown RBP13.67□□□□□ -0.22
SNORD3B-1-201ENST00000577988 A6NCN8 305 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 OR2AG2A6NM03 316 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 RAD51CO43502 376 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 SGTAO43765 313 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 OPA1O60313 960 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 POLBP06746 335 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 XRCC1P18887 633 aaPredicted RBP13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 ITGA8P53708 1063 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 DRG2P55039 364 aaKnown RBP13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 ARL4CP56559 192 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 C2orf54Q08AI8 447 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CALCOCO2Q13137 446 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 NR1D2Q14995 579 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 ANKRD20A4Q4UJ75 823 aa13.66□□□□□ -0.22
SNORD3B-1-201ENST00000577988 CCDC157Q569K6 752 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms