RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-208ENST00000577524 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 KIAA1143Q96AT1 154 aaPredicted RBP5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 ULK4Q96C45 1275 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 MRGPRX2Q96LB1 330 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 TEFMQ96QE5 360 aaKnown RBP5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 VPS35Q96QK1 796 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 WDR24Q96S15 920 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 TTC1Q99614 292 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 TBL1YQ9BQ87 522 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 APOL2Q9BQE5 337 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 ZPBPQ9BS86 351 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 DESI2Q9BSY9 194 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 EFHD1Q9BUP0 239 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 PRR14Q9BWN1 585 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 B3GNT4Q9C0J1 378 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 SEMA6CQ9H3T2 930 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 PRORYQ9H606 182 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 ASB8Q9H765 288 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 C10orf88Q9H8K7 445 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 LRRC40Q9H9A6 602 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 VPS37BQ9H9H4 285 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 PRDM8Q9NQV8 689 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 POT1Q9NUX5 634 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 CPNE7Q9UBL6 633 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 TRIM10Q9UDY6 481 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 TBC1D29Q9UFV1 150 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 CNOT6Q9ULM6 557 aaKnown RBP5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 GUCA1BQ9UMX6 200 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 SPO11Q9Y5K1 396 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 DNMT3AQ9Y6K1 912 aaPredicted RBP5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 OAS3Q9Y6K5 1087 aaKnown RBP5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 DUSP10Q9Y6W6 482 aa5.34□□□□□ -1.55
ARHGAP28-208ENST00000577524 KNTC1P50748 2209 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 TDRD6O60522 2096 aaKnown RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 IGF2RP11717 2491 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 PRAMEF33A0A0G2JMD5 474 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 IGHV5-10-1A0A0J9YXX1 117 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 GRID2IPA4D2P6 1211 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 LILRA5A6NI73 299 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 OR2AG2A6NM03 316 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 POM121CA8CG34 1229 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 B4E171 279 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 ERVH48-1M5A8F1 160 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 AURKAO14965 403 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 CHUKO15111 745 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 ATXN7O15265 892 aaPredicted RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 UGT1A9O60656 530 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 PRAMEF10O60809 474 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 POP7O75817 140 aaKnown RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 SRP72O76094 671 aaKnown RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 UBXN7O94888 489 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 PRAMEF1O95521 474 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 IFNB1P01574 187 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 THRAP10827 490 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 TYRP1P17643 537 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 XRCC1P18887 633 aaPredicted RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 UGT1A6P19224 532 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 UGT1A1P22309 533 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 UGT1A4P22310 534 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 RPL10P27635 214 aaKnown RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 STIP1P31948 543 aaKnown RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 UGT1A3P35503 534 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 PPARGP37231 505 aaPredicted RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 SLC19A1P41440 591 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 TSPAN7P41732 249 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 PDX1P52945 283 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 DRG2P55039 364 aaKnown RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 TMPRSS15P98073 1019 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 FOXM1Q08050 763 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 ADCY2Q08462 1091 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 PRKAA1Q13131 559 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 CLN3Q13286 438 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 SQSTM1Q13501 440 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 C16orf72Q14CZ0 275 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 RPS6KA1Q15418 735 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 PARP6Q2NL67 630 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 ATP13A5Q4VNC0 1218 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 ZRANB3Q5FWF4 1079 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 FNBP1LQ5T0N5 605 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 FAM182AQ5T1J6 154 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 GPRC6AQ5T6X5 926 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 IRGCQ6NXR0 463 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 WDR74Q6RFH5 385 aaPredicted RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 CEACAM20Q6UY09 585 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 PPP1R21Q6ZMI0 780 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 TMEM26Q6ZUK4 368 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 DET1Q7L5Y6 550 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 LINC00523Q86TU6 105 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 HOOK3Q86VS8 718 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 ZFAND4Q86XD8 727 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 GAS2L3Q86XJ1 694 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 TTC30BQ8N4P2 665 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 CCDC89Q8N998 374 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 FAM71DQ8N9W8 422 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 LSM14AQ8ND56 463 aaKnown RBP5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 OR4K2Q8NGD2 314 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 CCDC110Q8TBZ0 833 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 DTX3LQ8TDB6 740 aa5.33□□□□□ -1.56
ARHGAP28-208ENST00000577524 MAIP1Q8WWC4 291 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms