RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SLC6A19Q695T7 634 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 FAM199XQ6PEV8 388 aaPredicted RBP13.1□□□□□ -0.31
COPS3-214ENST00000577246 MED25Q71SY5 747 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 IQCKQ8N0W5 287 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 TMEM102Q8N9M5 508 aaPredicted RBP13.1□□□□□ -0.31
COPS3-214ENST00000577246 ARRDC2Q8TBH0 407 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 MR1Q95460 341 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 TSGA13Q96PP4 275 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 TUBB2BQ9BVA1 445 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 NUP85Q9BW27 656 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 XPO4Q9C0E2 1151 aaKnown RBP13.1□□□□□ -0.31
COPS3-214ENST00000577246 ARFGAP3Q9NP61 516 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 GPR83Q9NYM4 423 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 MYO1AQ9UBC5 1043 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 SLC23A2Q9UGH3 650 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 SNX7Q9UNH6 387 aa13.1□□□□□ -0.31
COPS3-214ENST00000577246 UBA6A0AVT1 1052 aaPredicted RBP13.09□□□□□ -0.31
COPS3-214ENST00000577246 TLCD2A6NGC4 264 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 LRRC10BA6NIK2 292 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 MFSD11O43934 449 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 KLHL41O60662 606 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 CLDN1O95832 211 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 RAB40ALP0C0E4 278 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 EBLN1P0CF75 366 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 BRAFP15056 766 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 TNFRSF8P28908 595 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 DRG2P55039 364 aaKnown RBP13.09□□□□□ -0.31
COPS3-214ENST00000577246 MYL5Q02045 173 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 ELOAQ14241 798 aaKnown RBP13.09□□□□□ -0.31
COPS3-214ENST00000577246 PAFAH1B3Q15102 231 aaKnown RBP13.09□□□□□ -0.31
COPS3-214ENST00000577246 PLCL1Q15111 1095 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 ASIC2Q16515 512 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 HADHQ16836 314 aaKnown RBP13.09□□□□□ -0.31
COPS3-214ENST00000577246 PRR30Q53SZ7 412 aaPredicted RBP13.09□□□□□ -0.31
COPS3-214ENST00000577246 ZRANB3Q5FWF4 1079 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 SLC34A3Q8N130 599 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 CARFQ8N187 725 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 NIPA2Q8N8Q9 360 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 FDCSPQ8NFU4 85 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 TTC25Q96NG3 672 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 LRFN5Q96NI6 719 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
COPS3-214ENST00000577246 RUFY1Q96T51 708 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 HAUS4Q9H6D7 363 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 FANCEQ9HB96 536 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 LATS2Q9NRM7 1088 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 KCND1Q9NSA2 647 aa13.09□□□□□ -0.31
COPS3-214ENST00000577246 ERRFI1Q9UJM3 462 aaPredicted RBP13.09□□□□□ -0.31
COPS3-214ENST00000577246 HLA-DQB2P05538 268 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 ELAVL4P26378 380 aaKnown RBP13.08□□□□□ -0.32
COPS3-214ENST00000577246 COL8A1P27658 744 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 CD86P42081 329 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 VAV2P52735 878 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 SLC25A11Q02978 314 aaKnown RBP13.08□□□□□ -0.32
COPS3-214ENST00000577246 NIPAL4Q0D2K0 466 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 LAMB3Q13751 1172 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 KCNAB1Q14722 419 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 CCDC183Q5T5S1 534 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 ZNF648Q5T619 568 aaPredicted RBP13.08□□□□□ -0.32
COPS3-214ENST00000577246 ZNF517Q6ZMY9 492 aaPredicted RBP13.08□□□□□ -0.32
COPS3-214ENST00000577246 TRAPPC5Q8IUR0 188 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 D2HGDHQ8N465 521 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 Q8NA96 180 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 GLIS1Q8NBF1 620 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 GPR26Q8NDV2 337 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 BRSK1Q8TDC3 778 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 CPT1BQ92523 772 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 MOCOSQ96EN8 888 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 ZNF830Q96NB3 372 aaPredicted RBP13.08□□□□□ -0.32
COPS3-214ENST00000577246 MFRPQ9BY79 579 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 NLNQ9BYT8 704 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 GPR63Q9BZJ6 419 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 ZCCHC2Q9C0B9 1178 aaKnown RBP13.08□□□□□ -0.32
COPS3-214ENST00000577246 AKIRIN1Q9H9L7 192 aaPredicted RBP13.08□□□□□ -0.32
COPS3-214ENST00000577246 MAGEE1Q9HCI5 957 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 LUZP4Q9P127 313 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 C5AR2Q9P296 337 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 IP6K2Q9UHH9 426 aa13.08□□□□□ -0.32
COPS3-214ENST00000577246 LRRC53A6NM62 1247 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 ZNF185O15231 689 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 ZBTB11O95625 1053 aaPredicted RBP13.07□□□□□ -0.32
COPS3-214ENST00000577246 ALPPP05187 535 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 TCF4P15884 667 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 IL4RP24394 825 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 SSR1P43307 286 aaKnown RBP13.07□□□□□ -0.32
COPS3-214ENST00000577246 KLHL30Q0D2K2 578 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 IHHQ14623 411 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 NR6A1Q15406 480 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 VWA5B1Q5TIE3 1220 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 NCBP2-AS2Q69YL0 99 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 ARMC6Q6NXE6 501 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 OOSP2Q86WS3 158 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 ZNF547Q8IVP9 402 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 MAP7D3Q8IWC1 876 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 CCNYQ8ND76 341 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 GDAP1Q8TB36 358 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 ADAMTS17Q8TE56 1095 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 TCTN2Q96GX1 697 aa13.07□□□□□ -0.32
COPS3-214ENST00000577246 SGSM3Q96HU1 749 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms