RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 POP7O75817 140 aaKnown RBP15.01□□□□□ -0.01
SMG6-220ENST00000576218 RPL22P35268 128 aaKnown RBP15.01□□□□□ -0.01
SMG6-220ENST00000576218 VPS41P49754 854 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 CLCNKAP51800 687 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 PCBP4P57723 403 aaKnown RBP15.01□□□□□ -0.01
SMG6-220ENST00000576218 SEMA5AQ13591 1074 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 SIX1Q15475 284 aaPredicted RBP15.01□□□□□ -0.01
SMG6-220ENST00000576218 TBC1D25Q3MII6 688 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 ZNF547Q8IVP9 402 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 REXO1L1PQ8IX06 675 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 NXPE1Q8N323 547 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 FGF11Q92914 225 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 MAGOHBQ96A72 148 aaKnown RBP15.01□□□□□ -0.01
SMG6-220ENST00000576218 SGF29Q96ES7 293 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 ZNF578Q96N58 590 aaPredicted RBP15.01□□□□□ -0.01
SMG6-220ENST00000576218 CMKLR1Q99788 373 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 DPYSL5Q9BPU6 564 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 NUDT22Q9BRQ3 303 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 AP1M1Q9BXS5 423 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 VPS37BQ9H9H4 285 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 NLE1Q9NVX2 485 aaPredicted RBP15.01□□□□□ -0.01
SMG6-220ENST00000576218 CPNE7Q9UBL6 633 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 PISDQ9UG56 409 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 LOXL2Q9Y4K0 774 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 CACNA1BQ00975 2339 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 IGHV1OR21-1A0A087WYE8 117 aa15□□□□□ -0.01
SMG6-220ENST00000576218 AP3B1O00203 1094 aa15□□□□□ -0.01
SMG6-220ENST00000576218 TAF4O00268 1085 aa15□□□□□ -0.01
SMG6-220ENST00000576218 PLD2O14939 933 aa15□□□□□ -0.01
SMG6-220ENST00000576218 B4GAT1O43505 415 aa15□□□□□ -0.01
SMG6-220ENST00000576218 KCNJ13O60928 360 aa15□□□□□ -0.01
SMG6-220ENST00000576218 TNFSF15O95150 251 aa15□□□□□ -0.01
SMG6-220ENST00000576218 CCKBRP32239 447 aa15□□□□□ -0.01
SMG6-220ENST00000576218 PDX1P52945 283 aa15□□□□□ -0.01
SMG6-220ENST00000576218 CTSCP53634 463 aa15□□□□□ -0.01
SMG6-220ENST00000576218 CACNG1Q06432 222 aa15□□□□□ -0.01
SMG6-220ENST00000576218 NR1D2Q14995 579 aa15□□□□□ -0.01
SMG6-220ENST00000576218 TRIP13Q15645 432 aaPredicted RBP15□□□□□ -0.01
SMG6-220ENST00000576218 CLPPQ16740 277 aaPredicted RBP15□□□□□ -0.01
SMG6-220ENST00000576218 GPR33Q49SQ1 333 aa15□□□□□ -0.01
SMG6-220ENST00000576218 SNAP47Q5SQN1 464 aa15□□□□□ -0.01
SMG6-220ENST00000576218 ZNF449Q6P9G9 518 aa15□□□□□ -0.01
SMG6-220ENST00000576218 BEND7Q8N7W2 519 aaPredicted RBP15□□□□□ -0.01
SMG6-220ENST00000576218 GLIS1Q8NBF1 620 aa15□□□□□ -0.01
SMG6-220ENST00000576218 MS4A14Q96JA4 679 aa15□□□□□ -0.01
SMG6-220ENST00000576218 OSBPL9Q96SU4 736 aa15□□□□□ -0.01
SMG6-220ENST00000576218 TTC1Q99614 292 aa15□□□□□ -0.01
SMG6-220ENST00000576218 C19orf43Q9BQ61 176 aa15□□□□□ -0.01
SMG6-220ENST00000576218 TTC7AQ9ULT0 858 aaPredicted RBP15□□□□□ -0.01
SMG6-220ENST00000576218 PSMD13Q9UNM6 376 aa15□□□□□ -0.01
SMG6-220ENST00000576218 DNMT3AQ9Y6K1 912 aaPredicted RBP15□□□□□ -0.01
SMG6-220ENST00000576218 ZFC3H1O60293 1989 aaKnown RBP15□□□□□ -0.01
SMG6-220ENST00000576218 ACACAQ13085 2346 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 A6NCN8 305 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 SUN1O94901 812 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 SLC35G4P0C7Q5 338 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 AMD1P17707 334 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 ADRA1DP25100 572 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 ACRV1P26436 265 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 CD1CP29017 333 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 MAPK10P53779 464 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 EPHA4P54764 986 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 SESN2P58004 480 aaPredicted RBP14.99□□□□□ -0.01
SMG6-220ENST00000576218 PRAMEP78395 509 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 SARNPP82979 210 aaKnown RBP14.99□□□□□ -0.01
SMG6-220ENST00000576218 XIAPP98170 497 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 CCDC173Q0VFZ6 552 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 MSLNQ13421 630 aaPredicted RBP14.99□□□□□ -0.01
SMG6-220ENST00000576218 KRT33BQ14525 404 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 GSE1Q14687 1217 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.99□□□□□ -0.01
SMG6-220ENST00000576218 NLRP9Q7RTR0 991 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 SERPINA9Q86WD7 417 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 OTUD6BQ8N6M0 293 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 PRELID2Q8N945 189 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 OR6P1Q8NGX9 317 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 NAT14Q8WUY8 206 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 NCSTNQ92542 709 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 TMEM159Q96B96 161 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 CDKN2AIPNLQ96HQ2 116 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 NAF1Q96HR8 494 aaKnown RBP14.99□□□□□ -0.01
SMG6-220ENST00000576218 CCDC74BQ96LY2 380 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 SEMA6CQ9H3T2 930 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 EIF2B3Q9NR50 452 aaKnown RBP14.99□□□□□ -0.01
SMG6-220ENST00000576218 POT1Q9NUX5 634 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 ZDHHC3Q9NYG2 299 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.99□□□□□ -0.01
SMG6-220ENST00000576218 ANAPC5Q9UJX4 755 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 PCDHGA8Q9Y5G5 932 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 APC2O95996 2303 aa14.99□□□□□ -0.01
SMG6-220ENST00000576218 KLHL33A6NCF5 533 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 MGAT4DA6NG13 374 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 OR52A4PA6NMU1 304 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 KRT14P02533 472 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 HGFP14210 728 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 ATP1B2P14415 290 aaPredicted RBP14.98□□□□□ -0.01
SMG6-220ENST00000576218 MPSTP25325 297 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 CSTF2P33240 577 aaKnown RBP eCLIP14.98□□□□□ -0.01
SMG6-220ENST00000576218 CA5AP35218 305 aa14.98□□□□□ -0.01
SMG6-220ENST00000576218 GRIA1P42261 906 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms