RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 TCF12Q99081 682 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 TIMM29Q9BSF4 260 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 GSDMCQ9BYG8 508 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 PLAC1Q9HBJ0 212 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 IARS2Q9NSE4 1012 aaKnown RBP13.79□□□□□ -0.2
RPAIN-217ENST00000575711 UCKL1Q9NWZ5 548 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 VPS9D1Q9Y2B5 631 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 PCYT1BQ9Y5K3 369 aaPredicted RBP13.79□□□□□ -0.2
RPAIN-217ENST00000575711 ADAMTS9Q9P2N4 1935 aa13.79□□□□□ -0.2
RPAIN-217ENST00000575711 LMO7DNF2Z398 122 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 QSOX1O00391 747 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 TPP1O14773 563 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 FFAR2O15552 330 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 FLRT2O43155 660 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 OR1I1O60431 355 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 SPAG6O75602 509 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 ANXA6P08133 673 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 CELA2BP08218 269 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-217ENST00000575711 VCLP18206 1134 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 GRK6P43250 576 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 PRLHRP49683 370 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 CTBSQ01459 385 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 PLA2G4EQ3MJ16 856 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 BCL7AQ4VC05 210 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 CAPN12Q6ZSI9 719 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 LRRC6Q86X45 466 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 ZNF547Q8IVP9 402 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 UNC5BQ8IZJ1 945 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 SLC25A45Q8N413 288 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 PNPLA1Q8N8W4 532 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 EIF1ADQ8N9N8 165 aaKnown RBP13.78□□□□□ -0.2
RPAIN-217ENST00000575711 CCL4L1Q8NHW4 92 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 GPBAR1Q8TDU6 330 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 SETD7Q8WTS6 366 aaKnown RBP13.78□□□□□ -0.2
RPAIN-217ENST00000575711 CCDC97Q96F63 343 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-217ENST00000575711 DUSP23Q9BVJ7 150 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 CLPBQ9H078 707 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 VPS37BQ9H9H4 285 aa13.78□□□□□ -0.2
RPAIN-217ENST00000575711 INTS10Q9NVR2 710 aaKnown RBP13.78□□□□□ -0.2
RPAIN-217ENST00000575711 DNMT3AQ9Y6K1 912 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-217ENST00000575711 FRYLO94915 3013 aa13.77□□□□□ -0.2
RPAIN-217ENST00000575711 UBA6A0AVT1 1052 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-217ENST00000575711 KLHL33A6NCF5 533 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 PRMT5O14744 637 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-217ENST00000575711 YY2O15391 372 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 KCNJ13O60928 360 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 POP7O75817 140 aaKnown RBP13.77□□□□□ -0.21
RPAIN-217ENST00000575711 OR56A5P0C7T3 313 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 CD59P13987 128 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 AK4P27144 223 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-217ENST00000575711 TNFRSF8P28908 595 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 PBLDP30039 288 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-217ENST00000575711 SSTR1P30872 391 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 ACTR1BP42025 376 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 SLC1A2P43004 574 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 ACTR1AP61163 376 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 MGAT5Q09328 741 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 TP53BP1Q12888 1972 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-217ENST00000575711 CTBP1Q13363 440 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 SLMAPQ14BN4 828 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 DEFB133Q30KQ1 61 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 TRMT10BQ6PF06 316 aaKnown RBP13.77□□□□□ -0.21
RPAIN-217ENST00000575711 SLC30A9Q6PML9 568 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 LVRNQ6Q4G3 990 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 DBX2Q6ZNG2 339 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 C3orf62Q6ZUJ4 267 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 AMZ2Q86W34 360 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 RELL1Q8IUW5 271 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 DENND6AQ8IWF6 608 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 CNTN4Q8IWV2 1026 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 CLDN19Q8N6F1 224 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 BEND7Q8N7W2 519 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-217ENST00000575711 NAT14Q8WUY8 206 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 TMEM131Q92545 1883 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 ANKZF1Q9H8Y5 726 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 LRRC4CQ9HCJ2 640 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 KLC4Q9NSK0 619 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 NLGN3Q9NZ94 848 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 MOCS1Q9NZB8 636 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 GNPTGQ9UJJ9 305 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 FBXO5Q9UKT4 447 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 CDV3Q9UKY7 258 aaKnown RBP13.77□□□□□ -0.21
RPAIN-217ENST00000575711 KCNK6Q9Y257 313 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 DNAJC16Q9Y2G8 782 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 PLEKHM1Q9Y4G2 1056 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 BPTFQ12830 3046 aa13.77□□□□□ -0.21
RPAIN-217ENST00000575711 ZFHX2Q9C0A1 2572 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-217ENST00000575711 PLXNB3Q9ULL4 1909 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 SGTAO43765 313 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 FTH1P02794 183 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 RPS3P23396 243 aaKnown RBP eCLIP13.76□□□□□ -0.21
RPAIN-217ENST00000575711 STX2P32856 288 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 EIF3BP55884 814 aaKnown RBP13.76□□□□□ -0.21
RPAIN-217ENST00000575711 GPX6P59796 221 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 TEDDM1Q5T9Z0 273 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 PTRHD1Q6GMV3 140 aaKnown RBP13.76□□□□□ -0.21
RPAIN-217ENST00000575711 ZNF449Q6P9G9 518 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 KIAA0408Q6ZU52 694 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 C11orf96Q7Z7L8 435 aa13.76□□□□□ -0.21
RPAIN-217ENST00000575711 NRROSQ86YC3 692 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms