RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 AK5Q9Y6K8 562 aa13.07□□□□□ -0.32
RPAIN-216ENST00000575599 COL27A1Q8IZC6 1860 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-216ENST00000575599 CHD8Q9HCK8 2581 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 CEP295Q9C0D2 2601 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 AKAP13Q12802 2813 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 PDZK1P1A8MUH7 402 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 D6RAR5 112 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 NTN3O00634 580 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-216ENST00000575599 PNLIPP16233 465 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 ZNF7P17097 686 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-216ENST00000575599 ALDH4A1P30038 563 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 PBLDP30039 288 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-216ENST00000575599 PPM1FP49593 454 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-216ENST00000575599 VPS41P49754 854 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 PDX1P52945 283 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 CTSCP53634 463 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 OR1D5P58170 312 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 DR1Q01658 176 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 DHX34Q14147 1143 aaKnown RBP13.06□□□□□ -0.32
RPAIN-216ENST00000575599 PPP1R7Q15435 360 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 CYP1B1Q16678 543 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 AMZ1Q400G9 498 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 ZRANB3Q5FWF4 1079 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 ZNF761Q86XN6 746 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-216ENST00000575599 KDF1Q8NAX2 398 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-216ENST00000575599 NAT14Q8WUY8 206 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 ATXN7L3BQ96GX2 97 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 TIMM29Q9BSF4 260 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 ZMYND15Q9H091 742 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 PRDM8Q9NQV8 689 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 NLE1Q9NVX2 485 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-216ENST00000575599 ZMIZ1Q9ULJ6 1067 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 ATXN7L1Q9ULK2 861 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-216ENST00000575599 SLC30A1Q9Y6M5 507 aa13.06□□□□□ -0.32
RPAIN-216ENST00000575599 A6NCN8 305 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 PPM1DO15297 605 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 MPOP05164 745 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 F3P13726 295 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 SLC2A4P14672 509 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 VCLP18206 1134 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 MAP9Q49MG5 647 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 GLE1Q53GS7 698 aaKnown RBP13.05□□□□□ -0.32
RPAIN-216ENST00000575599 C3orf38Q5JPI3 329 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 FNBP1LQ5T0N5 605 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 TTC27Q6P3X3 843 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 TMEM220Q6QAJ8 160 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 C4orf22Q6V702 233 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 ZNF438Q7Z4V0 828 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 SNX20Q7Z614 316 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 B3GNT8Q7Z7M8 397 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 SFRP1Q8N474 314 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 BEND7Q8N7W2 519 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-216ENST00000575599 STYXQ8WUJ0 223 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 ULK4Q96C45 1275 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 DCUN1D1Q96GG9 259 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 FOXP3Q9BZS1 431 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 NRSN2Q9GZP1 204 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 STN1Q9H668 368 aaKnown RBP13.05□□□□□ -0.32
RPAIN-216ENST00000575599 CASS4Q9NQ75 786 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 EIF2B3Q9NR50 452 aaKnown RBP13.05□□□□□ -0.32
RPAIN-216ENST00000575599 ENTPD2Q9Y5L3 495 aa13.05□□□□□ -0.32
RPAIN-216ENST00000575599 MAP1BP46821 2468 aaKnown RBP13.05□□□□□ -0.32
RPAIN-216ENST00000575599 KNTC1P50748 2209 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 HEATR9A2RTY3 570 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 FAM187AA6NFU0 413 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 MROH6A6NGR9 719 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 AGRPO00253 132 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 ZW10O43264 779 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 KRT14P02533 472 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 RHOXF2BP0C7M4 288 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 PRSS56P0CW18 603 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 RPL10P27635 214 aaKnown RBP13.04□□□□□ -0.32
RPAIN-216ENST00000575599 CDKN1CP49918 316 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-216ENST00000575599 CLCNKAP51800 687 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 DRG2P55039 364 aaKnown RBP13.04□□□□□ -0.32
RPAIN-216ENST00000575599 SESN2P58004 480 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-216ENST00000575599 GABREP78334 506 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 B4GALNT1Q00973 533 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 HHEXQ03014 270 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 GPS1Q13098 491 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 IYDQ6PHW0 289 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 FOXR1Q6PIV2 292 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 SYDE1Q6ZW31 735 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-216ENST00000575599 TAS2R42Q7RTR8 314 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 C11orf96Q7Z7L8 435 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 SLC9B2Q86UD5 537 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 AMZ2Q86W34 360 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 NXPE1Q8N323 547 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 NOA1Q8NC60 698 aaKnown RBP13.04□□□□□ -0.32
RPAIN-216ENST00000575599 SGF29Q96ES7 293 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 CCDC97Q96F63 343 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-216ENST00000575599 CDKN2AIPNLQ96HQ2 116 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 SLC38A3Q99624 504 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 C19orf43Q9BQ61 176 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 RHOXF2Q9BQY4 288 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 RDH14Q9HBH5 336 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 KCNK4Q9NYG8 393 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 FAM8A1Q9UBU6 413 aa13.04□□□□□ -0.32
RPAIN-216ENST00000575599 SATB2Q9UPW6 733 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms