RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ACRV1P26436 265 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 ACADVLP49748 655 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 SLC5A9Q2M3M2 681 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 FRA10AC1Q70Z53 315 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 PDSS2Q86YH6 399 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 RBFAQ8N0V3 343 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 HBEGFQ99075 208 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 LINC00597Q9H2U6 94 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 ZDHHC6Q9H6R6 413 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 IL23AQ9NPF7 189 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 PSMD13Q9UNM6 376 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 HCFC2Q9Y5Z7 792 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 DNAJA2O60884 412 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 MOSPD3O75425 235 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 ERVPABLB-1P60509 514 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 MYLK3Q32MK0 819 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 LRRC66Q68CR7 880 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 ADGRG2Q8IZP9 1017 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 TEX37Q96LM6 180 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 MAP10Q9P2G4 905 aa23.36■■□□□ 1.33
NPLOC4-217ENST00000574897 TRBV5-4A0A0C4DH59 114 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 SMNDC1O75940 238 aaKnown RBP eCLIP23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 LHCGRP22888 699 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 ARL1P40616 181 aaPredicted RBP23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 NTHL1P78549 312 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 IRGCQ6NXR0 463 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 LETMD1Q6P1Q0 360 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 DPY19L3Q6ZPD9 716 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 GPRIN3Q6ZVF9 776 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 SPATA24Q86W54 205 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 PQLC1Q8N2U9 271 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 MIER2Q8N344 545 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 CHST14Q8NCH0 376 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 OR56A4Q8NGH8 313 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 CLP1Q92989 425 aaKnown RBP23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 C1orf50Q9BV19 199 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 KLHL4Q9C0H6 718 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 NOL11Q9H8H0 719 aaKnown RBP23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 SPAM1P38567 509 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 MAPK8P45983 427 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 CCNHP51946 323 aaPredicted RBP23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 SNRPD1P62314 119 aaKnown RBP23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 LILRA2Q8N149 483 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 NSUN3Q9H649 340 aaKnown RBP23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 COPS7BQ9H9Q2 264 aaPredicted RBP23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 MRGBPQ9NV56 204 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 GNPTGQ9UJJ9 305 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 APPL1Q9UKG1 709 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 CROTQ9UKG9 612 aa23.35■■□□□ 1.33
NPLOC4-217ENST00000574897 CHD9Q3L8U1 2897 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 MLYCDO95822 493 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 UGT2B4P06133 528 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 RPS3P23396 243 aaKnown RBP eCLIP23.34■■□□□ 1.334e-7■■■■□ 21.2
NPLOC4-217ENST00000574897 HTR6P50406 440 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 SLC7A2P52569 658 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 C8orf82Q6P1X6 216 aaPredicted RBP23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 Q6ZVU0 165 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 TRIM8Q9BZR9 551 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 ELOVL2Q9NXB9 296 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 NUDT4Q9NZJ9 180 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 HS3ST2Q9Y278 367 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 UBTFL6P0CB48 400 aaPredicted RBP23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 UROSP10746 265 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 PHKG1Q16816 387 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 GRAMD1BQ3KR37 738 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 XKR7Q5GH72 579 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 TMEM154Q6P9G4 183 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 DLG3Q92796 817 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 PDLIM5Q96HC4 596 aaKnown RBP23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 APOL5Q9BWW9 433 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 BBS2Q9BXC9 721 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 SUV39H2Q9H5I1 410 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 SPAG4Q9NPE6 437 aa23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 SDR39U1Q9NRG7 319 aaPredicted RBP23.34■■□□□ 1.33
NPLOC4-217ENST00000574897 CARNS1A5YM72 827 aa23.33■■□□□ 1.33
NPLOC4-217ENST00000574897 CASQ2O14958 399 aaPredicted RBP23.33■■□□□ 1.33
NPLOC4-217ENST00000574897 FFAR2O15552 330 aa23.33■■□□□ 1.33
NPLOC4-217ENST00000574897 PRR35P0CG20 571 aa23.33■■□□□ 1.33
NPLOC4-217ENST00000574897 TRIM25Q14258 630 aaKnown RBP23.33■■□□□ 1.33
NPLOC4-217ENST00000574897 ASB9Q96DX5 294 aa23.33■■□□□ 1.33
NPLOC4-217ENST00000574897 GPR45Q9Y5Y3 372 aa23.33■■□□□ 1.33
NPLOC4-217ENST00000574897 KATNA1O75449 491 aa23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 PSMD8P48556 350 aa23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 HSPA7P48741 367 aa23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 PTSQ03393 145 aa23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 RPS6KA2Q15349 733 aa23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 GOLGA7Q7Z5G4 137 aa23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 NXPE1Q8N323 547 aa23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 ATP6V1E2Q96A05 226 aa23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 ECHDC3Q96DC8 303 aa23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 TMEM181Q9P2C4 612 aa23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 CD300AQ9UGN4 299 aa23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 MBD1Q9UIS9 605 aaPredicted RBP23.33■■□□□ 1.32
NPLOC4-217ENST00000574897 OR7A17O14581 309 aa23.32■■□□□ 1.32
NPLOC4-217ENST00000574897 GDF5P43026 501 aa23.32■■□□□ 1.32
NPLOC4-217ENST00000574897 CREB5Q02930 508 aa23.32■■□□□ 1.32
NPLOC4-217ENST00000574897 CAPRIN1Q14444 709 aaKnown RBP23.32■■□□□ 1.32
NPLOC4-217ENST00000574897 CYP2R1Q6VVX0 501 aa23.32■■□□□ 1.32
NPLOC4-217ENST00000574897 ADAMTSL2Q86TH1 951 aa23.32■■□□□ 1.32
NPLOC4-217ENST00000574897 ASIC4Q96FT7 647 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms