RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 TGM7Q96PF1 710 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 CTRCQ99895 268 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 DDA1Q9BW61 102 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 ASPSCR1Q9BZE9 553 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 B3GNT4Q9C0J1 378 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 RBSNQ9H1K0 784 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 POT1Q9NUX5 634 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 SCHIP1Q9P0W5 487 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 SLC23A2Q9UGH3 650 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 PCDHA3Q9Y5H8 950 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 DUSP10Q9Y6W6 482 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 CFAP46Q8IYW2 2715 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 GOLGA6L9A6NEM1 432 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 OR2AG2A6NM03 316 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 OR52A4PA6NMU1 304 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 C2orf81A6NN90 581 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 B4E171 279 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 UGT1A9O60656 530 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 RAD1O60671 282 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 PPFIA2O75334 1257 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 TJP3O95049 919 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 PRAMEF1O95521 474 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 AGTP01019 485 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 EPOP01588 193 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 XRCC1P18887 633 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 UGT1A6P19224 532 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 MSH3P20585 1137 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 UGT1A1P22309 533 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 UGT1A4P22310 534 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 UGT1A3P35503 534 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 SLC19A1P41440 591 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 TSPAN7P41732 249 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 SEPHS1P49903 392 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 VAV2P52735 878 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 GFERP55789 205 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 UBE2IP63279 158 aaKnown RBP9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 FOXM1Q08050 763 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 PLCL1Q15111 1095 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 ANKRD20A2Q5SQ80 823 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 GPRC6AQ5T6X5 926 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 ANKRD20A1Q5TYW2 823 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 ANKRD20A3Q5VUR7 823 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 AADACL2Q6P093 401 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 RAD9BQ6WBX8 426 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 DET1Q7L5Y6 550 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 PEX26Q7Z412 305 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 AMZ2Q86W34 360 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 DTX1Q86Y01 620 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 ZNF547Q8IVP9 402 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 CACNA2D3Q8IZS8 1091 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 TXLNBQ8N3L3 684 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 UBL4BQ8N7F7 174 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 DDHD1Q8NEL9 900 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 CCDC110Q8TBZ0 833 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 EXTL1Q92935 676 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 KIAA1143Q96AT1 154 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 MED8Q96G25 268 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 TEFMQ96QE5 360 aaKnown RBP9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 APOL2Q9BQE5 337 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 SEMA4CQ9C0C4 833 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 UGT1A7Q9HAW7 530 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 UGT1A10Q9HAW8 530 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 UGT1A8Q9HAW9 530 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 IL26Q9NPH9 171 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 IL17CQ9P0M4 197 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 FAM8A1Q9UBU6 413 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 AMFRQ9UKV5 643 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 PSMD13Q9UNM6 376 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 AAR2Q9Y312 384 aaKnown RBP9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 PCDHGA3Q9Y5H0 932 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 ARL5AQ9Y689 179 aa9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 MN1Q10571 1320 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-212ENST00000573328 BOD1L1Q8NFC6 3051 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 BTNL10A8MVZ5 291 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 POLR1CO15160 346 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 CAPN5O15484 640 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 LPOP22079 712 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 PTPN7P35236 360 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 CAPZBP47756 277 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 CYP4F2P78329 520 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 TMPRSS15P98073 1019 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 MC2RQ01718 297 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 OLIG2Q13516 323 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 GPR18Q14330 331 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 PTPRCAPQ14761 206 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 LONRF2Q1L5Z9 754 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 FNBP1LQ5T0N5 605 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 IRGCQ6NXR0 463 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 TMEM220Q6QAJ8 160 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 ARHGEF18Q6ZSZ5 1173 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 ARHGAP22Q7Z5H3 698 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 RBM12BQ8IXT5 1001 aaKnown RBP9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 SYCE1Q8N0S2 351 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 RASGEF1AQ8N9B8 481 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 SPC24Q8NBT2 197 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 OR4K2Q8NGD2 314 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 RSC1A1Q92681 617 aa9.48□□□□□ -0.89
NPLOC4-212ENST00000573328 NKD1Q969G9 470 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms