RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 RSC1A1Q92681 617 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 C9orf72Q96LT7 481 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.8■□□□□ 0.44
CHD3-214ENST00000572579 TRIM5Q9C035 493 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 TRABDQ9H4I3 376 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 WASH6PQ9NQA3 447 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 IL17BQ9UHF5 180 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 ZFC3H1O60293 1989 aaKnown RBP17.8■□□□□ 0.44
CHD3-214ENST00000572579 SPTA1P02549 2419 aa17.8■□□□□ 0.44
CHD3-214ENST00000572579 SOWAHDA6NJG2 315 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 POP7O75817 140 aaKnown RBP17.79■□□□□ 0.44
CHD3-214ENST00000572579 UBXN7O94888 489 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 DLGAP3O95886 979 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 VIPP01282 170 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 ANKRD34CP0C6C1 535 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 SLC2A4P14672 509 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 FECHP22830 423 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 ADRA1AP35348 466 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 PPM1FP49593 454 aaPredicted RBP17.79■□□□□ 0.44
CHD3-214ENST00000572579 RAB15P59190 212 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 PPP1CAP62136 330 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 GPR18Q14330 331 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 PPP2R5EQ16537 467 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 AGAP9Q5VTM2 703 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 IL22RA1Q8N6P7 574 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 CCDC112Q8NEF3 446 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 BLOC1S5Q8TDH9 187 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 SRPK1Q96SB4 655 aaKnown RBP17.79■□□□□ 0.44
CHD3-214ENST00000572579 VAT1Q99536 393 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 FAM118BQ9BPY3 351 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 LACRTQ9GZZ8 138 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 TMEM184BQ9Y519 407 aaPredicted RBP17.79■□□□□ 0.44
CHD3-214ENST00000572579 ARL5AQ9Y689 179 aa17.79■□□□□ 0.44
CHD3-214ENST00000572579 PDZK1P1A8MUH7 402 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 CAPN5O15484 640 aaPredicted RBP17.78■□□□□ 0.44
CHD3-214ENST00000572579 MTSS1O43312 755 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 SGTAO43765 313 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 STK17BO94768 372 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 F8A1P23610 371 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 SPAM1P38567 509 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 ATP1A2P50993 1020 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 MPP3Q13368 585 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 GPRC6AQ5T6X5 926 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 RANBP10Q6VN20 620 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 RAD9BQ6WBX8 426 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 PLXDC1Q8IUK5 500 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 CCDC170Q8IYT3 715 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 ACTL9Q8TC94 416 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 ALG3Q92685 438 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 TGM7Q96PF1 710 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 APOL2Q9BQE5 337 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 ZMYND15Q9H091 742 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 EPB41L1Q9H4G0 881 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 STN1Q9H668 368 aaKnown RBP17.78■□□□□ 0.44
CHD3-214ENST00000572579 PCDHA3Q9Y5H8 950 aa17.78■□□□□ 0.44
CHD3-214ENST00000572579 EPN1Q9Y6I3 576 aaPredicted RBP17.78■□□□□ 0.44
CHD3-214ENST00000572579 HACD1B0YJ81 288 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 APOC4-APOC2K7ER74 178 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 APOC2P02655 101 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 HLA-DPA1P20036 260 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 IDSP22304 550 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 CTNNA1P35221 906 aaKnown RBP17.77■□□□□ 0.44
CHD3-214ENST00000572579 XRCC4Q13426 336 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 TMEM220Q6QAJ8 160 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 GLT6D1Q7Z4J2 308 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 DAAM2Q86T65 1068 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 TRAPPC5Q8IUR0 188 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 CCDC50Q8IVM0 306 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 NLGN4XQ8N0W4 816 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 BEND7Q8N7W2 519 aaPredicted RBP17.77■□□□□ 0.44
CHD3-214ENST00000572579 ZSCAN1Q8NBB4 408 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 DDHD1Q8NEL9 900 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 NLGN4YQ8NFZ3 816 aaPredicted RBP17.77■□□□□ 0.44
CHD3-214ENST00000572579 GPR150Q8NGU9 434 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 TEFMQ96QE5 360 aaKnown RBP17.77■□□□□ 0.44
CHD3-214ENST00000572579 FICDQ9BVA6 458 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 RBSNQ9H1K0 784 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 GBA3Q9H227 469 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 RSPH14Q9UHP6 348 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 TRHDEQ9UKU6 1024 aa17.77■□□□□ 0.44
CHD3-214ENST00000572579 GLYATL1P3A0A0U1RQE8 302 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 A0A0U1RQJ8 604 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 OR2AG2A6NM03 316 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 H7C0C1 242 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 POLR1CO15160 346 aaPredicted RBP17.76■□□□□ 0.43
CHD3-214ENST00000572579 PYGMP11217 842 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 ATP5OP48047 213 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 SEPHS1P49903 392 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 ZNF75DP51815 510 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 XIAPP98170 497 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 OTUD4Q01804 1114 aaKnown RBP17.76■□□□□ 0.43
CHD3-214ENST00000572579 DMPKQ09013 629 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 NFE2L1Q14494 772 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 RPE65Q16518 533 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 ATP1A1-AS1Q5TC04 95 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 DENND5AQ6IQ26 1287 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 CEACAM20Q6UY09 585 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 LRRC57Q8N9N7 239 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 AVL9Q8NBF6 648 aa17.76■□□□□ 0.43
CHD3-214ENST00000572579 GDAP1Q8TB36 358 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms