RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 RALBP11234 206 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 SLC2A4P14672 509 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 GLB1P16278 677 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 ZNF7P17097 686 aaPredicted RBP7.68□□□□□ -1.18
SMG6-211ENST00000572369 CASQ1P31415 396 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 MC4RP32245 332 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 COILP38432 576 aaPredicted RBP7.68□□□□□ -1.18
SMG6-211ENST00000572369 CLDN6P56747 220 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 TMEM115Q12893 351 aaPredicted RBP7.68□□□□□ -1.18
SMG6-211ENST00000572369 GPS1Q13098 491 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 SEMA5AQ13591 1074 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 PPP1R7Q15435 360 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 SKIDA1Q1XH10 827 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 C14orf28Q4W4Y0 310 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 CCDC38Q502W7 563 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 PERM1Q5SV97 790 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 CERCAMQ5T4B2 595 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 GPRC6AQ5T6X5 926 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 TMPRSS7Q7RTY8 843 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 NRROSQ86YC3 692 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 KLHDC8BQ8IXV7 354 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 Q8N9G6 341 aaPredicted RBP7.68□□□□□ -1.18
SMG6-211ENST00000572369 PPHLN1Q8NEY8 458 aaKnown RBP7.68□□□□□ -1.18
SMG6-211ENST00000572369 STYXQ8WUJ0 223 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.68□□□□□ -1.18
SMG6-211ENST00000572369 CCDC74AQ96AQ1 378 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 ULK4Q96C45 1275 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 SCARF2Q96GP6 870 aaPredicted RBP7.68□□□□□ -1.18
SMG6-211ENST00000572369 DNAJC1Q96KC8 554 aaKnown RBP7.68□□□□□ -1.18
SMG6-211ENST00000572369 CCDC3Q9BQI4 270 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 STN1Q9H668 368 aaKnown RBP7.68□□□□□ -1.18
SMG6-211ENST00000572369 NLE1Q9NVX2 485 aaPredicted RBP7.68□□□□□ -1.18
SMG6-211ENST00000572369 LRIT1Q9P2V4 623 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 ANAPC5Q9UJX4 755 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 CLCA2Q9UQC9 943 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 DNAJC16Q9Y2G8 782 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 SAR1BQ9Y6B6 198 aa7.68□□□□□ -1.18
SMG6-211ENST00000572369 ARID1BQ8NFD5 2236 aaPredicted RBP7.68□□□□□ -1.18
SMG6-211ENST00000572369 LY6G6EA0A0G2JKS1 128 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 OR2AG2A6NM03 316 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 PDZK1P1A8MUH7 402 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 CFAP99D6REC4 459 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 CCL22O00626 93 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 TERTO14746 1132 aaKnown RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 GPR39O43194 453 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 LDB2O43679 373 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 NOBOXO60393 691 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 SUN1O94901 812 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 DKK1O94907 266 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 ECEL1O95672 775 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 MT-CO3P00414 261 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 ADRA1DP25100 572 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 ALDH4A1P30038 563 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 PBLDP30039 288 aaPredicted RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 EIF2S3P41091 472 aaKnown RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 GRIA1P42261 906 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 ZNF140P52738 457 aaPredicted RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 MAZP56270 477 aaKnown RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 SESN2P58004 480 aaPredicted RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 PRAMEP78395 509 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 INSM1Q01101 510 aaPredicted RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 NFATC2Q13469 925 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 SPIDRQ14159 915 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 SMAD1Q15797 465 aaKnown RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 KCTD19Q17RG1 926 aaPredicted RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 TTC27Q6P3X3 843 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 OGFOD3Q6PK18 319 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 TMEM220Q6QAJ8 160 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 DET1Q7L5Y6 550 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 SNX20Q7Z614 316 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 TRIM48Q8IWZ4 208 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 OTUD6BQ8N6M0 293 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 DDHD1Q8NEL9 900 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 GPR156Q8NFN8 814 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 WDR48Q8TAF3 677 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 DTX3LQ8TDB6 740 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 ZNF514Q96K75 400 aaPredicted RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 DEPDC7Q96QD5 511 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 GFM1Q96RP9 751 aaKnown RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 TTC1Q99614 292 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 FAM96AQ9H5X1 160 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 CASS4Q9NQ75 786 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 EIF2B3Q9NR50 452 aaKnown RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 BFARQ9NZS9 450 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 FAM8A1Q9UBU6 413 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 U3KQA8 63 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 ARHGEF17Q96PE2 2063 aaPredicted RBP7.67□□□□□ -1.18
SMG6-211ENST00000572369 CSMD1Q96PZ7 3565 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 OTOGQ6ZRI0 2925 aa7.67□□□□□ -1.18
SMG6-211ENST00000572369 GAPDHSO14556 408 aaPredicted RBP7.66□□□□□ -1.18
SMG6-211ENST00000572369 CHUKO15111 745 aa7.66□□□□□ -1.18
SMG6-211ENST00000572369 RRP8O43159 456 aaKnown RBP7.66□□□□□ -1.18
SMG6-211ENST00000572369 NUDT21O43809 227 aaKnown RBP7.66□□□□□ -1.18
SMG6-211ENST00000572369 RPLP0P05388 317 aaKnown RBP7.66□□□□□ -1.18
SMG6-211ENST00000572369 IDSP22304 550 aa7.66□□□□□ -1.18
SMG6-211ENST00000572369 ELAVL4P26378 380 aaKnown RBP7.66□□□□□ -1.18
SMG6-211ENST00000572369 PPARGP37231 505 aaPredicted RBP7.66□□□□□ -1.18
SMG6-211ENST00000572369 HALP42357 657 aa7.66□□□□□ -1.18
SMG6-211ENST00000572369 NPY2RP49146 381 aa7.66□□□□□ -1.18
SMG6-211ENST00000572369 FNTAP49354 379 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms