RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 GNAQP50148 359 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 PTENP60484 403 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 ZNF33AQ06730 810 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 ELAVL2Q12926 359 aaKnown RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 PDCLQ13371 301 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 CTTNQ14247 550 aaKnown RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 EMC2Q15006 297 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 ANKRD1Q15327 319 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 XKR9Q5GH70 373 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 KIAA1614Q5VZ46 1190 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 TXNDC8Q6A555 127 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 SLC27A1Q6PCB7 646 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 SASS6Q6UVJ0 657 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 TMTC3Q6ZXV5 915 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 BCDIN3DQ7Z5W3 292 aaKnown RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 MB21D2Q8IYB1 491 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 PTGR2Q8N8N7 351 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 TRIML1Q8N9V2 468 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 FSIP1Q8NA03 581 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 NCOA7Q8NI08 942 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 EXOC6Q8TAG9 804 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 CRYGNQ8WXF5 182 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 CD101Q93033 1021 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 C18orf25Q96B23 403 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 MSANTD3Q96H12 275 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 TCEANC2Q96MN5 208 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 LZTS2Q9BRK4 669 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 KRTAP17-1Q9BYP8 105 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 IFT80Q9P2H3 777 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 ANKMY1Q9P2S6 941 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 SLC12A4Q9UP95 1085 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 TMEM98Q9Y2Y6 226 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 KIF3AQ9Y496 699 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 YIPF1Q9Y548 306 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 ENTPD2Q9Y5L3 495 aa5.56□□□□□ -1.52
SF3B3-214ENST00000572365 ZFC3H1O60293 1989 aaKnown RBP5.56□□□□□ -1.52
SF3B3-214ENST00000572365 TP53BP1Q12888 1972 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-214ENST00000572365 USP9YO00507 2555 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-214ENST00000572365 CYP3A7-CYP3A51PA0A087WV96 503 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TBC1D3DA0A087WVF3 549 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TBC1D3IA0A087WXS9 549 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TBC1D3EA0A087X179 549 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TBC1D3KA0A087X1G2 549 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 A0A1B0GUA9 196 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TCRBV21S2A2A0A5A6 115 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TBC1D3BA6NDS4 549 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TBC1D3FA6NER0 549 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TMEM191CA6NGB0 347 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 LRRIQ4A6NIV6 560 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 SAC3D1A6NKF1 404 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 C3orf70A6NLC5 250 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TBC1D3LB9A6J9 549 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 STX16-NPEPL1H3BU86 382 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 J3KRW8 73 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 STX16O14662 325 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 RRP8O43159 456 aaKnown RBP5.55□□□□□ -1.52
SF3B3-214ENST00000572365 PSMD10O75832 226 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TDP2O95551 362 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TBC1D3HP0C7X1 549 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 C6P13671 934 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 HLA-EP13747 358 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 IGFBP2P18065 325 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TNFRSF1AP19438 455 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 CYP3A7P24462 503 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 GRK5P34947 590 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 CSRP3P50461 194 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TAS2R50P59544 299 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 CYP4F2P78329 520 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 IL9RQ01113 521 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 CYP4A11Q02928 519 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 GABPB1Q06547 395 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-214ENST00000572365 SPAG1Q07617 926 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 ABHD18Q0P651 414 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 GRIK2Q13002 908 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 PLD1Q13393 1074 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 CAPSQ13938 189 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 UPP1Q16831 310 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 SDHAF4Q5VUM1 108 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TBC1D3GQ6DHY5 549 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TBC1D3CQ6IPX1 549 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 SLC8B1Q6J4K2 584 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 WDR93Q6P2C0 686 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 PDXDC1Q6P996 788 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 CASC1Q6TDU7 716 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 HACE1Q8IYU2 909 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TBC1D3Q8IZP1 549 aaPredicted RBP5.55□□□□□ -1.52
SF3B3-214ENST00000572365 TERB1Q8NA31 727 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 OLIG1Q8TAK6 271 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 MMS19Q96T76 1030 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 REEP2Q9BRK0 252 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 ELOVL1Q9BW60 279 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 CIPCQ9C0C6 399 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 GPR88Q9GZN0 384 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 CHMP4BQ9H444 224 aaKnown RBP5.55□□□□□ -1.52
SF3B3-214ENST00000572365 DHX33Q9H6R0 707 aaKnown RBP5.55□□□□□ -1.52
SF3B3-214ENST00000572365 GAREM1Q9H706 876 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 ECT2Q9H8V3 914 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 PLEKHA2Q9HB19 425 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 XPNPEP1Q9NQW7 623 aa5.55□□□□□ -1.52
SF3B3-214ENST00000572365 ASIC5Q9NY37 505 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms