RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 LDLRAD1Q5T700 205 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 RAP1GAP2Q684P5 730 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 SLC2A7Q6PXP3 512 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 DPP10Q8N608 796 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 CDYL2Q8N8U2 506 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 PPM1MQ96MI6 270 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 UROC1Q96N76 676 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 PKMYT1Q99640 499 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 GPN2Q9H9Y4 310 aaPredicted RBP10.65□□□□□ -0.7
CCDC40-207ENST00000572253 ASPDHA6ND91 283 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 G3V2T6 193 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 M0QZQ0 153 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 TNFRSF10BO14763 440 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 RSL1D1O76021 490 aaKnown RBP10.65□□□□□ -0.7
CCDC40-207ENST00000572253 CDH3P22223 829 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 OR1E1P30953 314 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 RELAQ04206 551 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 ITGADQ13349 1161 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 TUSC3Q13454 348 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 NIPAL1Q6NVV3 410 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 FUBP1Q96AE4 644 aaKnown RBP10.65□□□□□ -0.7
CCDC40-207ENST00000572253 TEX37Q96LM6 180 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 MAGEE1Q9HCI5 957 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 PCTPQ9UKL6 214 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 B3GNT3Q9Y2A9 372 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 ORC6Q9Y5N6 252 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 SRCAPQ6ZRS2 3230 aa10.65□□□□□ -0.7
CCDC40-207ENST00000572253 FUOMA2VDF0 154 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 C2orf81A6NN90 581 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 OR4F21O95013 312 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 MATN1P21941 496 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 GSTM2P28161 218 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 IL2P60568 153 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 TIAL1Q01085 375 aaKnown RBP eCLIP10.65□□□□□ -0.71
CCDC40-207ENST00000572253 SERINC3Q13530 473 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 FAM110CQ1W6H9 321 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 SLC39A12Q504Y0 691 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 CPNE9Q8IYJ1 553 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 TMCO5AQ8N6Q1 288 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 METTL6Q8TCB7 284 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 CHPT1Q8WUD6 406 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 SNX19Q92543 992 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 SLC39A13Q96H72 371 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 ACOX2Q99424 681 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 CGREF1Q99674 301 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 RNF181Q9P0P0 153 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 DNAJB9Q9UBS3 223 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 DOLKQ9UPQ8 538 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 SCML2Q9UQR0 700 aa10.65□□□□□ -0.71
CCDC40-207ENST00000572253 TRIM64BA6NI03 449 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 GOLGA8CPA6NN73 597 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 J3QRK9 145 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 K7EPI3 171 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 PCNAP12004 261 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 YBX1P67809 324 aaKnown RBP10.64□□□□□ -0.71
CCDC40-207ENST00000572253 NR6A1Q15406 480 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 TGFBIQ15582 683 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 FBXL22Q6P050 247 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 TBPL2Q6SJ96 375 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 FRA10AC1Q70Z53 315 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 PGBD5Q8N414 524 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 FIG4Q92562 907 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 TADA1Q96BN2 335 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 FBXL8Q96CD0 374 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 C1QTNF3Q9BXJ4 246 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 NLE1Q9NVX2 485 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-207ENST00000572253 SLAMF8Q9P0V8 285 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-207ENST00000572253 PDE10AQ9Y233 779 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 ZFC3H1O60293 1989 aaKnown RBP10.64□□□□□ -0.71
CCDC40-207ENST00000572253 E5RI56 91 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 KPNA6O60684 536 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 KCNH1O95259 989 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 INHBBP09529 407 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 PKMP14618 531 aaKnown RBP10.64□□□□□ -0.71
CCDC40-207ENST00000572253 SHMT2P34897 504 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 MAPKAPK2P49137 400 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 PGFP49763 221 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 AGTR2P50052 363 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 MTPNP58546 118 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 PWP1Q13610 501 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 ZNF846Q147U1 533 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 EGFLAMQ63HQ2 1017 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 GLT6D1Q7Z4J2 308 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 R3HCC1LQ7Z5L2 792 aaKnown RBP10.64□□□□□ -0.71
CCDC40-207ENST00000572253 MRPL10Q7Z7H8 261 aaKnown RBP10.64□□□□□ -0.71
CCDC40-207ENST00000572253 ZBTB46Q86UZ6 589 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 RIMKLAQ8IXN7 391 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 SVOPLQ8N434 492 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 SLC15A4Q8N697 577 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 SUSD3Q96L08 255 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 ZNF382Q96SR6 550 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 ZNF408Q9H9D4 720 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 GALPQ9UBC7 116 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 EIF2B4Q9UI10 523 aaKnown RBP10.64□□□□□ -0.71
CCDC40-207ENST00000572253 TRIP12Q14669 1992 aaPredicted RBP10.64□□□□□ -0.71
CCDC40-207ENST00000572253 ANKRD12Q6UB98 2062 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 E2F6O75461 281 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 ALPLP05186 524 aa10.64□□□□□ -0.71
CCDC40-207ENST00000572253 HMBSP08397 361 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms