RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 OR13C4Q8NGS5 318 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 GSDMBQ8TAX9 411 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 STYXQ8WUJ0 223 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 ZNF669Q96BR6 464 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-209ENST00000571558 GPR63Q9BZJ6 419 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 ZFYVE1Q9HBF4 777 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 SATB2Q9UPW6 733 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 CSNK1G3Q9Y6M4 447 aa13.63□□□□□ -0.23
RPAIN-209ENST00000571558 TCRBV9S1A1TA0A576 114 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 CCDC78A2IDD5 438 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 ITGB2P05107 769 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 CYP2A6P11509 494 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-209ENST00000571558 XPAP23025 273 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-209ENST00000571558 AKT2P31751 481 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 SKIDA1Q1XH10 827 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 C3orf38Q5JPI3 329 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 KIAA1614Q5VZ46 1190 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 KIAA0930Q6ICG6 404 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-209ENST00000571558 ZNF449Q6P9G9 518 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 TRMT10BQ6PF06 316 aaKnown RBP13.62□□□□□ -0.23
RPAIN-209ENST00000571558 LIPIQ6XZB0 460 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 ATG14Q6ZNE5 492 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 CAPN12Q6ZSI9 719 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 LURAP1LQ8IV03 231 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 IQCKQ8N0W5 287 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.62□□□□□ -0.23
RPAIN-209ENST00000571558 OR4K2Q8NGD2 314 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 IFI44Q8TCB0 444 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 UBLCP1Q8WVY7 318 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-209ENST00000571558 CCNL2Q96S94 520 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-209ENST00000571558 ZNF446Q9NWS9 450 aa13.62□□□□□ -0.23
RPAIN-209ENST00000571558 FLNCQ14315 2725 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 LY6G6EA0A0G2JKS1 128 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 H7C0S8 307 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 PYCARD-AS1I3L0S3 204 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 K7ESM1 405 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 CCL22O00626 93 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 GAPDHSO14556 408 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-209ENST00000571558 TERTO14746 1132 aaKnown RBP13.61□□□□□ -0.23
RPAIN-209ENST00000571558 NUDT17P0C025 328 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 BPIP17213 487 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 HNRNPA2B1P22626 353 aaKnown RBP13.61□□□□□ -0.23
RPAIN-209ENST00000571558 LIG3P49916 1009 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 XIAPP98170 497 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 NFATC3Q12968 1075 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 LONRF1Q17RB8 773 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 ZNF574Q6ZN55 896 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-209ENST00000571558 RFLNAQ6ZTI6 216 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 MICALCLQ6ZW33 695 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 HSD11B1LQ7Z5J1 315 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 ABI3BPQ7Z7G0 1075 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 RAVER1Q8IY67 606 aaKnown RBP13.61□□□□□ -0.23
RPAIN-209ENST00000571558 WDR36Q8NI36 951 aaKnown RBP13.61□□□□□ -0.23
RPAIN-209ENST00000571558 FBF1Q8TES7 1133 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 CERS2Q96G23 380 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 CDKN2AIPNLQ96HQ2 116 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 COQ10AQ96MF6 247 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 ACSS3Q9H6R3 686 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 VPS37BQ9H9H4 285 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 STARD5Q9NSY2 213 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 RABGEF1Q9UJ41 708 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 ATXN7L1Q9ULK2 861 aaPredicted RBP13.61□□□□□ -0.23
RPAIN-209ENST00000571558 NFS1Q9Y697 457 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 U3KQA8 63 aa13.61□□□□□ -0.23
RPAIN-209ENST00000571558 SCN8AQ9UQD0 1980 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 A0A087WUV0 522 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-209ENST00000571558 CCDC162PA2VCL2 907 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 EME2A4GXA9 379 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-209ENST00000571558 FAM159BA6NKW6 160 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 PSMD11O00231 422 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 STX7O15400 261 aaKnown RBP13.6□□□□□ -0.23
RPAIN-209ENST00000571558 SLC31A1O15431 190 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 TSPAN6O43657 245 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 VAPBO95292 243 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 SLC4A1P02730 911 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 SHBGP04278 402 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 ITGA2BP08514 1039 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 PHBP35232 272 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 SPINT3P49223 89 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 ARHGEF7Q14155 803 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 CASP8Q14790 479 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 RBM44Q6ZP01 1051 aaKnown RBP13.6□□□□□ -0.23
RPAIN-209ENST00000571558 TECPR1Q7Z6L1 1165 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 HORMAD1Q86X24 394 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 HDAC10Q969S8 669 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 PRR11Q96HE9 360 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-209ENST00000571558 SGSM3Q96HU1 749 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 TBATAQ96M53 351 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 WRAP53Q9BUR4 548 aaKnown RBP13.6□□□□□ -0.23
RPAIN-209ENST00000571558 SUDS3Q9H7L9 328 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-209ENST00000571558 BPIFA1Q9NP55 256 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 IL26Q9NPH9 171 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 SMYD2Q9NRG4 433 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 IL1RAPL1Q9NZN1 696 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 NFKBIL1Q9UBC1 381 aaPredicted RBP13.6□□□□□ -0.23
RPAIN-209ENST00000571558 FKBPLQ9UIM3 349 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 PKP3Q9Y446 797 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 ENTPD2Q9Y5L3 495 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 HS3ST3A1Q9Y663 406 aa13.6□□□□□ -0.23
RPAIN-209ENST00000571558 A0A1W2PQU0 124 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms