RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CAPN1P07384 714 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 RAB40ALP0C0E4 278 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 FOLR1P15328 257 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 MSNP26038 577 aaKnown RBP6.78□□□□□ -1.32
CHD3-213ENST00000571249 ACVRL1P37023 503 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 MMP12P39900 470 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 ARCN1P48444 511 aaKnown RBP6.78□□□□□ -1.32
CHD3-213ENST00000571249 CASP6P55212 293 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 TPM4P67936 248 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 NKX6-1P78426 367 aaPredicted RBP6.78□□□□□ -1.32
CHD3-213ENST00000571249 GNA12Q03113 381 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 TFF3Q07654 80 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 NME3Q13232 169 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 MTA1Q13330 715 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 CNGA2Q16280 664 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 CACHD1Q5VU97 1274 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 CNNM4Q6P4Q7 775 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 CYB5D1Q6P9G0 228 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 BHLHB9Q6PI77 547 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 DOK6Q6PKX4 331 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 LRRC31Q6UY01 552 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 CERS6Q6ZMG9 384 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 ZNF783Q6ZMS7 281 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 C3P1Q6ZMU1 363 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 CAMKMTQ7Z624 323 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 SLC9B2Q86UD5 537 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 RAB43Q86YS6 212 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 TMEM151BQ8IW70 566 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 ZNF683Q8IZ20 524 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 NETO2Q8NC67 525 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 EHBP1Q8NDI1 1231 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 OR1N1Q8NGS0 311 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 COG1Q8WTW3 980 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 KLHL6Q8WZ60 621 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 DHX58Q96C10 678 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 GDAP1L1Q96MZ0 367 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 GBP5Q96PP8 586 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 OR2M4Q96R27 311 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 ZSWIM1Q9BR11 485 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 C19orf24Q9BVV8 132 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 TEX101Q9BY14 249 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 NLNQ9BYT8 704 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.78□□□□□ -1.32
CHD3-213ENST00000571249 GTPBP4Q9BZE4 634 aaKnown RBP6.78□□□□□ -1.32
CHD3-213ENST00000571249 CLEC4MQ9H2X3 399 aaPredicted RBP6.78□□□□□ -1.32
CHD3-213ENST00000571249 IL17CQ9P0M4 197 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 IMPACTQ9P2X3 320 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 APEX2Q9UBZ4 518 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 CNOT8Q9UFF9 292 aaKnown RBP6.78□□□□□ -1.32
CHD3-213ENST00000571249 KIAA1257Q9ULG3 409 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 FRMD4BQ9Y2L6 1034 aa6.78□□□□□ -1.32
CHD3-213ENST00000571249 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.78□□□□□ -1.32
CHD3-213ENST00000571249 TRIM64A6NGJ6 449 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 SERINC4A6NH21 518 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 TRIM64BA6NI03 449 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 ALOX12BO75342 701 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 SCRG1O75711 98 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 RHOBTB3O94955 611 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 CALCAP01258 141 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 IFNA2P01563 188 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 NR3C1P04150 777 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 PTMAP06454 111 aaKnown RBP6.77□□□□□ -1.33
CHD3-213ENST00000571249 IVLP07476 585 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 AMD1P17707 334 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 GM2AP17900 193 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 NELFEP18615 380 aaKnown RBP6.77□□□□□ -1.33
CHD3-213ENST00000571249 FOXL2P58012 376 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 RALGDSQ12967 914 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 CUL4BQ13620 913 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 SNTB1Q13884 538 aaKnown RBP6.77□□□□□ -1.33
CHD3-213ENST00000571249 LBRQ14739 615 aaKnown RBP6.77□□□□□ -1.33
CHD3-213ENST00000571249 COBLL1Q53SF7 1204 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 PLEKHS1Q5SXH7 462 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 IYDQ6PHW0 289 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 IGFL2Q6UWQ7 119 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 FAM92BQ6ZTR7 304 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 PRSS42Q7Z5A4 293 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 MRGPREQ86SM8 312 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 CDC20BQ86Y33 519 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 DEFB106AQ8N104 65 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 PDILTQ8N807 584 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 SIDT2Q8NBJ9 832 aaKnown RBP6.77□□□□□ -1.33
CHD3-213ENST00000571249 THAP3Q8WTV1 239 aaPredicted RBP6.77□□□□□ -1.33
CHD3-213ENST00000571249 MED15Q96RN5 788 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 TTYH3Q9C0H2 523 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 LRRC27Q9C0I9 530 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 TMEM8AQ9HCN3 771 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 ANLNQ9NQW6 1124 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 SPTLC3Q9NUV7 552 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 RMND1Q9NWS8 449 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 ACTR10Q9NZ32 417 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 SLC17A4Q9Y2C5 497 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 ATP8A1Q9Y2Q0 1164 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 TMEM98Q9Y2Y6 226 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 SLC30A1Q9Y6M5 507 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 TRRAPQ9Y4A5 3859 aa6.77□□□□□ -1.33
CHD3-213ENST00000571249 BIRC6Q9NR09 4857 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 TSPAN11A1L157 253 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 CFAP69A5D8W1 941 aa6.76□□□□□ -1.33
CHD3-213ENST00000571249 LILRA5A6NI73 299 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms