RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 TSPAN33Q86UF1 283 aa17.13■□□□□ 0.33
RPAIN-208ENST00000571043 SFTPA1Q8IWL2 248 aa17.13■□□□□ 0.33
RPAIN-208ENST00000571043 CPSF7Q8N684 471 aaKnown RBP17.13■□□□□ 0.33
RPAIN-208ENST00000571043 CHST14Q8NCH0 376 aa17.13■□□□□ 0.33
RPAIN-208ENST00000571043 FAM13CQ8NE31 585 aa17.13■□□□□ 0.33
RPAIN-208ENST00000571043 GIMAP7Q8NHV1 300 aa17.13■□□□□ 0.33
RPAIN-208ENST00000571043 MAGEC3Q8TD91 643 aa17.13■□□□□ 0.33
RPAIN-208ENST00000571043 SLC30A3Q99726 388 aa17.13■□□□□ 0.33
RPAIN-208ENST00000571043 HEPHQ9BQS7 1158 aa17.13■□□□□ 0.33
RPAIN-208ENST00000571043 WDR55Q9H6Y2 383 aaPredicted RBP17.13■□□□□ 0.33
RPAIN-208ENST00000571043 GALPQ9UBC7 116 aa17.13■□□□□ 0.33
RPAIN-208ENST00000571043 E9PBE3 544 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 STX16-NPEPL1H3BU86 382 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 K7EQS6 105 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 MAN2B1O00754 1011 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 STX16O14662 325 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 KLK8O60259 260 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 KLHL41O60662 606 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 SUPT7LO94864 414 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 GFAPP14136 432 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 DRD1P21728 446 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 PRKCQQ04759 706 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 PON2Q15165 354 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 TSNQ15631 228 aaKnown RBP17.12■□□□□ 0.33
RPAIN-208ENST00000571043 WASHC2DQ5SRD0 308 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 LRRC66Q68CR7 880 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 PTRHD1Q6GMV3 140 aaKnown RBP17.12■□□□□ 0.33
RPAIN-208ENST00000571043 FBXO39Q8N4B4 442 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 SORCS1Q8WY21 1168 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 FAM3CQ92520 227 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 EZH1Q92800 747 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-208ENST00000571043 FUBP1Q96AE4 644 aaKnown RBP17.12■□□□□ 0.33
RPAIN-208ENST00000571043 LINGO1Q96FE5 620 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 CIPCQ9C0C6 399 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 MRGBPQ9NV56 204 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 BAIAP2L1Q9UHR4 511 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 CRLS1Q9UJA2 301 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 BDP1A6H8Y1 2624 aa17.12■□□□□ 0.33
RPAIN-208ENST00000571043 TSPAN11A1L157 253 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 SUPT3HB4E1H0 165 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 GPR39O43194 453 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 MAGEC1O60732 1142 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 SUPT3HO75486 399 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 CHRM1P11229 460 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-208ENST00000571043 NFKBIAP25963 317 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 EPHA3P29320 983 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 CPA2P48052 419 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 INHBCP55103 352 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 KLF10Q13118 480 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 NAA25Q14CX7 972 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 PDCD2Q16342 344 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-208ENST00000571043 PFKFB4Q16877 469 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 MACC1Q6ZN28 852 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.11■□□□□ 0.33
RPAIN-208ENST00000571043 NXPE1Q8N323 547 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 RBM15BQ8NDT2 890 aaKnown RBP17.11■□□□□ 0.33
RPAIN-208ENST00000571043 HCAR2Q8TDS4 363 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 ACTRT2Q8TDY3 377 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 UCMAQ8WVF2 138 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 EXT2Q93063 718 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 MCUR1Q96AQ8 359 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 LRIG1Q96JA1 1093 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 KLHL32Q96NJ5 620 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 PLEKHG4BQ96PX9 1271 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 C1QTNF3Q9BXJ4 246 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 OSBPL1AQ9BXW6 950 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 MEAF6Q9HAF1 191 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 IKZF3Q9UKT9 509 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 HCN2Q9UL51 889 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 PLA2G4CQ9UP65 541 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 TRAF6Q9Y4K3 522 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 GOLGA8QA0A0J9YX86 632 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 GOLGA8OA6NCC3 632 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 NPEPPSL1A6NEC2 478 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 GOLGA8NF8WBI6 632 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 CDC7O00311 574 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 BTN3A1O00481 513 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 SDHDO14521 159 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 NEMP1O14524 444 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 DCXO43602 365 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 FGF4P08620 206 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 CYP2A6P11509 494 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-208ENST00000571043 ZNF30P17039 623 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 LHCGRP22888 699 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 COPAP53621 1224 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 PTSQ03393 145 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 GRSF1Q12849 480 aaKnown RBP eCLIP17.11■□□□□ 0.33
RPAIN-208ENST00000571043 CRY1Q16526 586 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 ZNF852Q6ZMS4 543 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 CPNE9Q8IYJ1 553 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 GPR26Q8NDV2 337 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 CEP70Q8NHQ1 597 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 CYB5D2Q8WUJ1 264 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 EEF1AKMT1Q8WVE0 214 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 ULK4Q96C45 1275 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 ZNF385DQ9H6B1 395 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 B4GALT6Q9UBX8 382 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 MUTYHQ9UIF7 546 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 WASF2Q9Y6W5 498 aa17.11■□□□□ 0.33
RPAIN-208ENST00000571043 TTC28Q96AY4 2481 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms