RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 FGF3P11487 239 aaPredicted RBP12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 ZNF7P17097 686 aaPredicted RBP12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 RBL1P28749 1068 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 GEMP55040 296 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 RWDD2BP57060 319 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 RAB15P59190 212 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 OTUD4Q01804 1114 aaKnown RBP12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 SEPT7Q16181 437 aaKnown RBP12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 ATP13A5Q4VNC0 1218 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 KHDC1Q4VXA5 237 aaKnown RBP12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 SNAP47Q5SQN1 464 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 KIAA1614Q5VZ46 1190 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 PCSK4Q6UW60 755 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 FAM151BQ6UXP7 276 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 KIAA1328Q86T90 577 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 TTC30BQ8N4P2 665 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 ACTL9Q8TC94 416 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 NCSTNQ92542 709 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 WBP1Q96G27 269 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 DDA1Q9BW61 102 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 OSBPL8Q9BZF1 889 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 IL26Q9NPH9 171 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.18□□□□□ -0.464e-6■■□□□ 13.9
CTDNEP1-205ENST00000570828 GMPR2Q9P2T1 348 aaKnown RBP12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 EFR3BQ9Y2G0 817 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 PCDHGA3Q9Y5H0 932 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 ARHGEF17Q96PE2 2063 aaPredicted RBP12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 UNC13CQ8NB66 2214 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 GLYATL1P3A0A0U1RQE8 302 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 EFCAB7A8K855 629 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 A8MU76 341 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 B4E171 279 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 PPFIA2O75334 1257 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 C1QL1O75973 258 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 VIPP01282 170 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 PTMAP06454 111 aaKnown RBP12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 PTPN7P35236 360 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 TSPAN7P41732 249 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 ATP1A2P50993 1020 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 VAV2P52735 878 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 EIF3EP60228 445 aaKnown RBP12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 UBE2IP63279 158 aaKnown RBP12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 TMEM115Q12893 351 aaPredicted RBP12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 ITGA9Q13797 1035 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 PRPSAP1Q14558 356 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 LDLRAP1Q5SW96 308 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 RAD9BQ6WBX8 426 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 VASH2Q86V25 355 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 DTX1Q86Y01 620 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 ZNF547Q8IVP9 402 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 TXLNBQ8N3L3 684 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 ZSCAN1Q8NBB4 408 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 ACRBPQ8NEB7 543 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 DTX3LQ8TDB6 740 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 BRSK1Q8TDC3 778 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 TTC9Q92623 222 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 SGF29Q96ES7 293 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 FICDQ9BVA6 458 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 TBC1D10AQ9BXI6 508 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 ASPSCR1Q9BZE9 553 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 C10orf88Q9H8K7 445 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 SLC39A1Q9NY26 324 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 IL17CQ9P0M4 197 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 PDP2Q9P2J9 529 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 SLC23A2Q9UGH3 650 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 TMPRSS11EQ9UL52 423 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 REXO2Q9Y3B8 237 aaKnown RBP12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 DUSP10Q9Y6W6 482 aa12.17□□□□□ -0.46
CTDNEP1-205ENST00000570828 GCN1Q92616 2671 aaKnown RBP12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 GRID2IPA4D2P6 1211 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 STX7O15400 261 aaKnown RBP12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 KCNN4O15554 427 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 EFSO43281 561 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 BUD23O43709 281 aaKnown RBP12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 ZNF189O75820 626 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 TJP3O95049 919 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 RBP3P10745 1247 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 XRCC1P18887 633 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 IDSP22304 550 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 PSMB4P28070 264 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 SRSF6Q13247 344 aaKnown RBP12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 CHRNA6Q15825 494 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 DCAF12Q5T6F0 453 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 DARS2Q6PI48 645 aaKnown RBP12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 PLXDC1Q8IUK5 500 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 ZNF843Q8N446 348 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 LRRC57Q8N9N7 239 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 DDHD1Q8NEL9 900 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 JPH3Q8WXH2 748 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 PMEPA1Q969W9 287 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 LRRC45Q96CN5 670 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 CXorf40BQ96DE9 158 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 PPP1R2P1Q96PQ5 205 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 BAG1Q99933 345 aaPredicted RBP12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 FAM118BQ9BPY3 351 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 LACRTQ9GZZ8 138 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 UCK1Q9HA47 277 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 POT1Q9NUX5 634 aa12.16□□□□□ -0.46
CTDNEP1-205ENST00000570828 OCIAD1Q9NX40 245 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms