RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 TRIM46Q7Z4K8 759 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 TRIM74Q86UV6 250 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 NLRP8Q86W28 1048 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 TDRPQ86YL5 185 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 GALNT13Q8IUC8 556 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PIANPQ8IYJ0 282 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 TMEFF1Q8IYR6 380 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 DEFB119Q8N690 84 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PLA2G15Q8NCC3 412 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 BTN2A2Q8WVV5 523 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 LPGAT1Q92604 370 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF514Q96K75 400 aaPredicted RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 LENG8Q96PV6 779 aaPredicted RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PANX3Q96QZ0 392 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 NDNQ99608 321 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 COL25A1Q9BXS0 654 aaPredicted RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 IQCGQ9H095 443 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 OR2AG1Q9H205 316 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 UGT1A7Q9HAW7 530 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 UGT1A10Q9HAW8 530 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 UGT1A8Q9HAW9 530 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PLAC1Q9HBJ0 212 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 SARS2Q9NP81 518 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 MBNL1Q9NR56 388 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 SMYD2Q9NRG4 433 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZSCAN32Q9NX65 697 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 KLQ9UEF7 1012 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 SUSD2Q9UGT4 822 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 EIF2B4Q9UI10 523 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 TRMT6Q9UJA5 497 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 RAB23Q9ULC3 237 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 SLC39A10Q9ULF5 831 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 CRYL1Q9Y2S2 319 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PCDHGA2Q9Y5H1 932 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PSAT1Q9Y617 370 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 ATXN2Q99700 1313 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 OR2AG2A6NM03 316 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 METTL12A8MUP2 240 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 PRR5-ARHGAP8B1AHC4 643 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 TRIM49D1C9J1S8 452 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 RAD51BO15315 384 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 ATP8B1O43520 1251 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 OR1I1O60431 355 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 TCEA3O75764 348 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 FAM155BO75949 473 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 CDK14O94921 469 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 TRIM16O95361 564 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 MT-ND3P03897 115 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 F7P08709 466 aaPredicted RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 SP9P0CG40 484 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 THEGLP0DJG4 465 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 TDGF1P13385 188 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 ATP1B2P14415 290 aaPredicted RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 PKMP14618 531 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 STMN1P16949 149 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 CHRM3P20309 590 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 RPS3P23396 243 aaKnown RBP eCLIP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 PBLDP30039 288 aaPredicted RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 GPC1P35052 558 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 CDKN1CP49918 316 aaPredicted RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 AFF3P51826 1226 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 KPNA2P52292 529 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 ADARP55265 1226 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 CLDN2P57739 230 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 YPEL5P62699 121 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 RACK1P63244 317 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 POU4F1Q01851 419 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 OVGP1Q12889 678 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 PDE1CQ14123 709 aaPredicted RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 BOP1Q14137 746 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 SIM2Q14190 667 aaPredicted RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 NFATC4Q14934 902 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 RASA2Q15283 850 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 INSCQ1MX18 579 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 PLA2G4EQ3MJ16 856 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 MROH9Q5TGP6 573 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 PMS2CLQ68D20 193 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 MRPL14Q6P1L8 145 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 CNSTQ6PJW8 725 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 CRTC3Q6UUV7 619 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 MACC1Q6ZN28 852 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 GCNT7Q6ZNI0 430 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 OTOAQ7RTW8 1153 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 RABEPKQ7Z6M1 372 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 LRRTM4Q86VH4 590 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 PARGQ86W56 976 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZC3HC1Q86WB0 502 aaKnown RBP6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 LINC00528Q8N1L1 170 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 FRMD1Q8N878 549 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 TMEM145Q8NBT3 493 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 DCAKDQ8WVC6 231 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 KCNJ9Q92806 393 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 CENPTQ96BT3 561 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 WDR92Q96MX6 357 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 SLC6A18Q96N87 628 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 SMC6Q96SB8 1091 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 GPR22Q99680 433 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 PRRX2Q99811 253 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 APOOQ9BUR5 198 aa6.5□□□□□ -1.37
CTDNEP1-204ENST00000570484 TMEM109Q9BVC6 243 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms