RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 A6NNZ2 444 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 H0Y8X5 98 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 TRIM16O95361 564 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 HPDP32754 393 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 KIAA1024LP59773 190 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 PDE1CQ14123 709 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 PPM1JQ5JR12 505 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 KYAT3Q6YP21 454 aaKnown RBP15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 TRAPPC5Q8IUR0 188 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 TMEM145Q8NBT3 493 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 CABS1Q96KC9 395 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 PANX3Q96QZ0 392 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 SELENOSQ9BQE4 189 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 POPDC3Q9HBV1 291 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 GPAMQ9HCL2 828 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 FBXO4Q9UKT5 387 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 MED16Q9Y2X0 877 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 HS3ST3A1Q9Y663 406 aa15.21■□□□□ 0.03
HERPUD1-219ENST00000570273 COPEO14579 308 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 SPAG7O75391 227 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 FTH1P02794 183 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 C2P06681 752 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 SLC35E2BP0CK96 405 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 BRAFP15056 766 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 CREB1P16220 341 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 ZNF8P17098 575 aaPredicted RBP15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 CD27P26842 260 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 AVPR2P30518 371 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 PRLHRP49683 370 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 IRF9Q00978 393 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 TIAL1Q01085 375 aaKnown RBP eCLIP15.2■□□□□ 0.023e-6■■■■□ 22.7
HERPUD1-219ENST00000570273 NFATC4Q14934 902 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 UGT3A1Q6NUS8 523 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 TMEM220Q6QAJ8 160 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 CRTC3Q6UUV7 619 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 ARMCX6Q7L4S7 300 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 SIDT2Q8NBJ9 832 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 ALKBH8Q96BT7 664 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 APOPT1Q96IL0 206 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 BMFQ96LC9 184 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 SLC6A18Q96N87 628 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 TSNARE1Q96NA8 513 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 AASDHPPTQ9NRN7 309 aa15.2■□□□□ 0.02
HERPUD1-219ENST00000570273 PLXND1Q9Y4D7 1925 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 A0A087X1B8 175 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 SGTAO43765 313 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 HOXC4P09017 264 aaPredicted RBP15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 CD9P21926 228 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 OAS2P29728 719 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 PBLDP30039 288 aaPredicted RBP15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 GMPRP36959 345 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 RABIFP47224 123 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 CSRP3P50461 194 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 PFN3P60673 137 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 SLC18A2Q05940 514 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 BCL7AQ4VC05 210 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 LPCAT2Q7L5N7 544 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 CCDC91Q7Z6B0 441 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 ABI3BPQ7Z7G0 1075 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 TBC1D1Q86TI0 1168 aaPredicted RBP15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 C11orf74Q86VG3 221 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 SPNS2Q8IVW8 549 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 TMEFF1Q8IYR6 380 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 BEND7Q8N7W2 519 aaPredicted RBP15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 GIMAP7Q8NHV1 300 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 CD200R1Q8TD46 325 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 ZNF514Q96K75 400 aaPredicted RBP15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 ORAI3Q9BRQ5 295 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 FAM126AQ9BYI3 521 aaPredicted RBP15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 SLC13A1Q9BZW2 595 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 MIR1-1HGQ9H1L0 117 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 KCNK9Q9NPC2 374 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 GALPQ9UBC7 116 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 EIF2B4Q9UI10 523 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 MOSPD1Q9UJG1 213 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 SMG5Q9UPR3 1016 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 ANKRD6Q9Y2G4 727 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 ACOT9Q9Y305 439 aa15.19■□□□□ 0.02
HERPUD1-219ENST00000570273 TOR1BO14657 336 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 MAGEC1O60732 1142 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 ZNF37AP17032 561 aaPredicted RBP15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 NR1D1P20393 614 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 KELP23276 732 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 SKIV2L2P42285 1042 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 CLCN7P51798 805 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 THOP1P52888 689 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 YPEL5P62699 121 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 SRSF5Q13243 272 aaKnown RBP15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 PLA2G4EQ3MJ16 856 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 TTLL9Q3SXZ7 439 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 SH2D5Q6ZV89 423 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 OTOAQ7RTW8 1153 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 LRRTM4Q86VH4 590 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 ZBTB2Q8N680 514 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 BANPQ8N9N5 519 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 OR13H1Q8NG92 308 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 KCTD4Q8WVF5 259 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 GAB3Q8WWW8 586 aa15.18■□□□□ 0.02
HERPUD1-219ENST00000570273 ELMO1Q92556 727 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms