RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 AENQ8WTP8 325 aaKnown RBP14.3□□□□□ -0.12
COMMD4-225ENST00000569245 HNRNPLLQ8WVV9 542 aaKnown RBP14.3□□□□□ -0.12
COMMD4-225ENST00000569245 PATE1Q8WXA2 126 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 PLEKHG4BQ96PX9 1271 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 APOL2Q9BQE5 337 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 PHACTR1Q9C0D0 580 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 STRADBQ9C0K7 418 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 TSPYL1Q9H0U9 437 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 NFKBIL1Q9UBC1 381 aaPredicted RBP14.3□□□□□ -0.12
COMMD4-225ENST00000569245 KCNK6Q9Y257 313 aa14.3□□□□□ -0.12
COMMD4-225ENST00000569245 A0A1W2PQM1 296 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 D6RAR5 112 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 TMX2-CTNND1H3BSU7 103 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 RRP8O43159 456 aaKnown RBP14.29□□□□□ -0.12
COMMD4-225ENST00000569245 NUAK1O60285 661 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 ERLIN1O75477 346 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 AP2A1O95782 977 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 H2AFXP16104 143 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-225ENST00000569245 SPAM1P38567 509 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 INHBCP55103 352 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 OR1D5P58170 312 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 SARNPP82979 210 aaKnown RBP14.29□□□□□ -0.12
COMMD4-225ENST00000569245 MAP9Q49MG5 647 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 EMBQ6PCB8 327 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 CRTC3Q6UUV7 619 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 FAM151BQ6UXP7 276 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 PPP1R21Q6ZMI0 780 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 LRRC69Q6ZNQ3 347 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 NAGSQ8N159 534 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 TTC30BQ8N4P2 665 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 FGF11Q92914 225 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 FMO2Q99518 471 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 LRRC40Q9H9A6 602 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 IL26Q9NPH9 171 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 ATXN7L1Q9ULK2 861 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-225ENST00000569245 PCYT1BQ9Y5K3 369 aaPredicted RBP14.29□□□□□ -0.12
COMMD4-225ENST00000569245 CELSR3Q9NYQ7 3312 aa14.29□□□□□ -0.12
COMMD4-225ENST00000569245 GLYATL1P3A0A0U1RQE8 302 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 C2orf81A6NN90 581 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 GPR89AB7ZAQ6 455 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 AGRPO00253 132 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 STX7O15400 261 aaKnown RBP14.28□□□□□ -0.12
COMMD4-225ENST00000569245 PPFIA2O75334 1257 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 MTX2O75431 263 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 CDK14O94921 469 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 APC2O95996 2303 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 GPR89BP0CG08 455 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 MLNP12872 115 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 LMAN1P49257 510 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 OLIG2Q13516 323 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 GTF2H3Q13889 308 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 SPARCL1Q14515 664 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 TBC1D25Q3MII6 688 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 ATP13A5Q4VNC0 1218 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 RANBP10Q6VN20 620 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 CEP128Q6ZU80 1094 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 USP53Q70EK8 1073 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 B3GNT8Q7Z7M8 397 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 ADGRG6Q86SQ4 1221 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 C17orf82Q86X59 251 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-225ENST00000569245 GSPT2Q8IYD1 628 aaKnown RBP14.28□□□□□ -0.12
COMMD4-225ENST00000569245 WDR36Q8NI36 951 aaKnown RBP14.28□□□□□ -0.12
COMMD4-225ENST00000569245 ZNF578Q96N58 590 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-225ENST00000569245 TTC25Q96NG3 672 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 TMEM74Q96NL1 305 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 TBL1YQ9BQ87 522 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 ASXL3Q9C0F0 2248 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 ZMYND15Q9H091 742 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 OSGEPL1Q9H4B0 414 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 XAB2Q9HCS7 855 aaKnown RBP14.28□□□□□ -0.12
COMMD4-225ENST00000569245 KLC4Q9NSK0 619 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 ARGLU1Q9NWB6 273 aaPredicted RBP14.28□□□□□ -0.12
COMMD4-225ENST00000569245 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.28□□□□□ -0.12
COMMD4-225ENST00000569245 IL17CQ9P0M4 197 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 TBC1D29Q9UFV1 150 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 ARL5AQ9Y689 179 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 LAMA5O15230 3695 aa14.28□□□□□ -0.12
COMMD4-225ENST00000569245 LRP4O75096 1905 aa14.27□□□□□ -0.12
COMMD4-225ENST00000569245 CCDC187A0A096LP49 1063 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 E7ESA3 106 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 DYNC1I1O14576 645 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 EIF3HO15372 352 aaKnown RBP eCLIP14.27□□□□□ -0.13
COMMD4-225ENST00000569245 B4GAT1O43505 415 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 TLX3O43711 291 aaPredicted RBP14.27□□□□□ -0.13
COMMD4-225ENST00000569245 VEGFDO43915 354 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 UGT1A9O60656 530 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 UGT1A6P19224 532 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 LPOP22079 712 aaPredicted RBP14.27□□□□□ -0.13
COMMD4-225ENST00000569245 UGT1A1P22309 533 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 UGT1A4P22310 534 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 ADRA1AP35348 466 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 UGT1A3P35503 534 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 UGT1A5P35504 534 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 GPR3P46089 330 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 PDX1P52945 283 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 ARL4CP56559 192 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 B4GALNT1Q00973 533 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 CHRNA6Q15825 494 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 INSCQ1MX18 579 aa14.27□□□□□ -0.13
COMMD4-225ENST00000569245 PLA2G4EQ3MJ16 856 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms