RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	WDR74	Q6RFH5	385 aa	Predicted RBP	10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	PPP1R21	Q6ZMI0	780 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	CCDC81	Q6ZN84	652 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	GSTA5	Q7RTV2	222 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	CLEC14A	Q86T13	490 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	ZNF761	Q86XN6	746 aa	Predicted RBP	10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	FAM129C	Q86XR2	697 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	SLITRK4	Q8IW52	837 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	ZSCAN1	Q8NBB4	408 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	DDHD1	Q8NEL9	900 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	CCDC74B	Q96LY2	380 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	TAAR9	Q96RI9	348 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	NUDT22	Q9BRQ3	303 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	ASPSCR1	Q9BZE9	553 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	B3GNT4	Q9C0J1	378 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	SEMA6C	Q9H3T2	930 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	UGT1A7	Q9HAW7	530 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	UGT1A10	Q9HAW8	530 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	UGT1A8	Q9HAW9	530 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	HOMER3	Q9NSC5	361 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	POT1	Q9NUX5	634 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	ZNF106	Q9H2Y7	1883 aa	Known RBP	10.21	□□□□□ -0.78
UBR1-207	ENST00000568782	TEX51	A0A1B0GUA7	166 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	OR2AG2	A6NM03	316 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782		A8MU76	341 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	POP7	O75817	140 aa	Known RBP	10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	HGF	P14210	728 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	ADRA1A	P35348	466 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	PPARG	P37231	505 aa	Predicted RBP	10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	ATP1A2	P50993	1020 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	RAB15	P59190	212 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	TMPRSS15	P98073	1019 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	TLE3	Q04726	772 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	KLF1	Q13351	362 aa	Predicted RBP	10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	SPARCL1	Q14515	664 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	GPR33	Q49SQ1	333 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	ZRANB3	Q5FWF4	1079 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	FNBP1L	Q5T0N5	605 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	DCAF12	Q5T6F0	453 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	MEI1	Q5TIA1	1274 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	CYB5D1	Q6P9G0	228 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	ABRAXAS1	Q6UWZ7	409 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	C4orf22	Q6V702	233 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	WASH2P	Q6VEQ5	465 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	ZNF662	Q6ZS27	426 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	TMEM26	Q6ZUK4	368 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	TAS2R42	Q7RTR8	314 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	SNX20	Q7Z614	316 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	SLC13A5	Q86YT5	568 aa	Predicted RBP	10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	WDFY3	Q8IZQ1	3526 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	RCBTB1	Q8NDN9	531 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	SLC35B2	Q8TB61	432 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	STYX	Q8WUJ0	223 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	USP7	Q93009	1102 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	COPS8	Q99627	209 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	UCK1	Q9HA47	277 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	ARNT2	Q9HBZ2	717 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	WASH6P	Q9NQA3	447 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	SMOX	Q9NWM0	555 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	SLC39A1	Q9NY26	324 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	FKBPL	Q9UIM3	349 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	ACSL5	Q9ULC5	683 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	PIKFYVE	Q9Y2I7	2098 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	ZKSCAN5	Q9Y2L8	839 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	ASPM	Q8IZT6	3477 aa		10.2	□□□□□ -0.78
UBR1-207	ENST00000568782	MGAT4D	A6NG13	374 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	LILRA5	A6NI73	299 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	STMND1	H3BQB6	276 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	AP3B1	O00203	1094 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	CASC3	O15234	703 aa	Known RBP	10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	UBXN7	O94888	489 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	AP2A1	O95782	977 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	SLC35G4	P0C7Q5	338 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	THRA	P10827	490 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	LIPC	P11150	499 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	ITIH1	P19827	911 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	MPST	P25325	297 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	PBLD	P30039	288 aa	Predicted RBP	10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	DRG2	P55039	364 aa	Known RBP	10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	VAC14	Q08AM6	782 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	CDH17	Q12864	832 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	SNX1	Q13596	522 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	POU6F1	Q14863	301 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	PLCL1	Q15111	1095 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	MANEA	Q5SRI9	462 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	AGAP9	Q5VTM2	703 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	ARMC6	Q6NXE6	501 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	DET1	Q7L5Y6	550 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	RASGEF1A	Q8N9B8	481 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	ZDHHC12	Q96GR4	267 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	TEFM	Q96QE5	360 aa	Known RBP	10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	UBL7	Q96S82	380 aa	Predicted RBP	10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	CCNL2	Q96S94	520 aa	Predicted RBP	10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	ZPBP	Q9BS86	351 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	PAK5	Q9P286	719 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	KLHL3	Q9UH77	587 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	ANAPC5	Q9UJX4	755 aa		10.19	□□□□□ -0.78
UBR1-207	ENST00000568782	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	10.19	□□□□□ -0.78

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