RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-231	ENST00000568626	TNF	P01375	233 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	FTH1	P02794	183 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	ZNF806	P0C7X5	589 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	VCL	P18206	1134 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	GP5	P40197	560 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	GNPDA1	P46926	289 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	RXRG	P48443	463 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	POLD2	P49005	469 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	EIF3B	P55884	814 aa	Known RBP	11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	MPP1	Q00013	466 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	TAOK1	Q7L7X3	1001 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	LDB1	Q86U70	411 aa	Predicted RBP	11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	HID1	Q8IV36	788 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	PHACTR4	Q8IZ21	702 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	SDR16C5	Q8N3Y7	309 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	FSTL5	Q8N475	847 aa	Predicted RBP	11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	HNRNPLL	Q8WVV9	542 aa	Known RBP	11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	OR1E3	Q8WZA6	343 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	LINC00615	Q96LM1	132 aa	Predicted RBP	11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	PANX3	Q96QZ0	392 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	ELF4	Q99607	663 aa	Predicted RBP	11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	CCDC77	Q9BR77	488 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	TIMM29	Q9BSF4	260 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	BOC	Q9BWV1	1114 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	P2RY12	Q9H244	342 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	RHOJ	Q9H4E5	214 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	CYP4F12	Q9HCS2	524 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	DNAJC28	Q9NX36	388 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	SPAST	Q9UBP0	616 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	APOBEC3B	Q9UH17	382 aa	Known RBP	11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	RABGEF1	Q9UJ41	708 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	MOSPD1	Q9UJG1	213 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	SNX11	Q9Y5W9	270 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	IKBKG	Q9Y6K9	419 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	SDK1	Q7Z5N4	2213 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	PI4KA	P42356	2102 aa		11.84	□□□□□ -0.51
FANCA-231	ENST00000568626	GPR179	Q6PRD1	2367 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	EXOC1L	A0A1B0GW35	172 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	PATE3	B3GLJ2	98 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	OR1I1	O60431	355 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	NUDT17	P0C025	328 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	ZNF883	P0CG24	379 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	CTSE	P14091	401 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	PKM	P14618	531 aa	Known RBP	11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	JUND	P17535	347 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	HSD17B3	P37058	310 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	CCT8	P50990	548 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	CTSC	P53634	463 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	ATXN3	P54252	364 aa	Predicted RBP	11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	BNC1	Q01954	994 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	DMPK	Q09013	629 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	ILF3	Q12906	894 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	ELOC	Q15369	112 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	CSRP2	Q16527	193 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	PYCR3	Q53H96	274 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	ZNF648	Q5T619	568 aa	Predicted RBP	11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	PTRHD1	Q6GMV3	140 aa	Known RBP	11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	TMEM220	Q6QAJ8	160 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	MICALCL	Q6ZW33	695 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	STRA8	Q7Z7C7	330 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	CLDN19	Q8N6F1	224 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	PPM1N	Q8N819	430 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	KCNJ9	Q92806	393 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	TSACC	Q96A04	125 aa	Predicted RBP	11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	SGF29	Q96ES7	293 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	GSDMC	Q9BYG8	508 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	EPB41L4B	Q9H329	900 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	MRPL40	Q9NQ50	206 aa	Known RBP	11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	SMYD2	Q9NRG4	433 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	ZNHIT2	Q9UHR6	403 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	CRYL1	Q9Y2S2	319 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626	OTOGL	Q3ZCN5	2332 aa		11.83	□□□□□ -0.52
FANCA-231	ENST00000568626		A0A1B0GTQ1	180 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	C17orf113	A0A1B0GUU1	675 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	LNP1	A1A4G5	178 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	OR2AG2	A6NM03	316 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	KPNA5	O15131	536 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	SGTA	O43765	313 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	AHSG	P02765	367 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	INHBA	P08476	426 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	ENG	P17813	658 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	CD9	P21926	228 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	CNTF	P26441	200 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	EPHA8	P29322	1005 aa	Predicted RBP	11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	SPR	P35270	261 aa	Predicted RBP	11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	SERPINB9	P50453	376 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	CLCNKA	P51800	687 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	PLOD1	Q02809	727 aa	Predicted RBP	11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	SLC29A2	Q14542	456 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	TMED2	Q15363	201 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	UAP1	Q16222	522 aa	Predicted RBP	11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	INSC	Q1MX18	579 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	HLA-B	Q31612	363 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	GRTP1	Q5TC63	336 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	CRTC3	Q6UUV7	619 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	DET1	Q7L5Y6	550 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	RD3	Q7Z3Z2	195 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	AMZ2	Q86W34	360 aa		11.82	□□□□□ -0.52
FANCA-231	ENST00000568626	ZC3HC1	Q86WB0	502 aa	Known RBP	11.82	□□□□□ -0.52

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