RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 NPLOC4Q8TAT6 608 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 CLK4Q9HAZ1 481 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 TMPRSS4Q9NRS4 437 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 PIH1D1Q9NWS0 290 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 ZSCAN5CA6NGD5 496 aaPredicted RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 A8MU76 341 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 RECQL5O94762 991 aaPredicted RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 F2P00734 622 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 ZNF865P0CJ78 1059 aaPredicted RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 SSR2P43308 183 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 C1QTNF8P60827 252 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 BTN3A2P78410 334 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 GCNT1Q02742 428 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 ARHGAP1Q07960 439 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 TMIEQ8NEW7 156 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 HEXDCQ8WVB3 486 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 SLC35C1Q96A29 364 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 BORCS8Q96FH0 119 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 ACAT2Q9BWD1 397 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 CRISPLD1Q9H336 500 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 COL20A1Q9P218 1284 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 CRNNQ9UBG3 495 aaPredicted RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 RAPGEFL1Q9UHV5 662 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 PCDHA3Q9Y5H8 950 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 TRBV23OR9-2A0A075B6M9 112 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 FAM86C2PA6NEL3 165 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 ZNF726A6NNF4 738 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 SLC33A1O00400 549 aaPredicted RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 PSIP1O75475 530 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 TNFP01375 233 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 RLN1P04808 185 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 IRF2P14316 349 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 GALK1P51570 392 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 LARS2Q15031 903 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 C9orf64Q5T6V5 341 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 SLC25A25Q6KCM7 469 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 POLNQ7Z5Q5 900 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 C17orf64Q86WR6 236 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 GOLM1Q8NBJ4 401 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 CHST4Q8NCG5 386 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 DQX1Q8TE96 717 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 AP3S1Q92572 193 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 OXNAD1Q96HP4 312 aaPredicted RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 IL22Q9GZX6 179 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 NUAK2Q9H093 628 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 EPB41L1Q9H4G0 881 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 POPDC2Q9HBU9 364 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 EURLQ9NYK6 297 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 GMIPQ9P107 970 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 IKZF2Q9UKS7 526 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 MED31Q9Y3C7 131 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 DHX15O43143 795 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 CYP3A5P20815 502 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 ATP5A1P25705 553 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 SLC41A1Q8IVJ1 513 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 ZNF527Q8NB42 609 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 PIWIL2Q8TC59 973 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 MYLPFQ96A32 169 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 OMA1Q96E52 524 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 NDC1Q9BTX1 674 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 M0QX08 132 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 PLOD3O60568 738 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 FAM228BP0C875 321 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 PABPC4LP0CB38 370 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 NPR3P17342 541 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 TAL1P17542 331 aaPredicted RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 PON1P27169 355 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 MSANTD2Q6P1R3 559 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 ABRAXAS1Q6UWZ7 409 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 FAM151BQ6UXP7 276 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 SLC29A4Q7RTT9 530 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 MTDHQ86UE4 582 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 DENND6BQ8NEG7 585 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 EMID1Q96A84 441 aaPredicted RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 DNAJC28Q9NX36 388 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.18□□□□□ -1.42
CDH13-209ENST00000567109 IKZF3Q9UKT9 509 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 MAFFQ9ULX9 164 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 SLC31A1O15431 190 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 PIGRP01833 764 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 MSL3P1P0C860 447 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 SPATA31C1P0DKV0 1188 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 LRPAP1P30533 357 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 VLDLRP98155 873 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 MC1RQ01726 317 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 DUSP4Q13115 394 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 FRG1Q14331 258 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 SQLEQ14534 574 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 DUPD1Q68J44 220 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 BICRALQ6AI39 1079 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 ALG1LQ6GMV1 187 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 AFTPHQ6ULP2 937 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 DEF8Q6ZN54 512 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 TMEM161BQ8NDZ6 487 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 TSTD1Q8NFU3 115 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 OR2AJ1Q8NGZ0 328 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 DCAKDQ8WVC6 231 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 TRIB2Q92519 343 aa6.18□□□□□ -1.42
CDH13-209ENST00000567109 RBM18Q96H35 190 aaKnown RBP6.18□□□□□ -1.42
CDH13-209ENST00000567109 MNTQ99583 582 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms