RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CLN3Q13286 438 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 GPR33Q49SQ1 333 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 DCAF12Q5T6F0 453 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 ZNF449Q6P9G9 518 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 INO80CQ6PI98 192 aaPredicted RBP16.47■□□□□ 0.23
USB1-211ENST00000565662 CRTC3Q6UUV7 619 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 FAM151BQ6UXP7 276 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 CEACAM20Q6UY09 585 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 TMEM26Q6ZUK4 368 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 B4GALNT4Q76KP1 1039 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 SPC24Q8NBT2 197 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 ZNF398Q8TD17 642 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 DCUN1D1Q96GG9 259 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 NAF1Q96HR8 494 aaKnown RBP16.47■□□□□ 0.23
USB1-211ENST00000565662 TRIT1Q9H3H1 467 aaKnown RBP16.47■□□□□ 0.23
USB1-211ENST00000565662 BPIFA1Q9NP55 256 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 ACSL5Q9ULC5 683 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 ZKSCAN5Q9Y2L8 839 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 PLEKHM1Q9Y4G2 1056 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 CELSR3Q9NYQ7 3312 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 ZFYVE26Q68DK2 2539 aa16.47■□□□□ 0.23
USB1-211ENST00000565662 PRR19A6NJB7 356 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 H7C0S8 307 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 AURKAO14965 403 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 CAPN5O15484 640 aaPredicted RBP16.46■□□□□ 0.23
USB1-211ENST00000565662 SRP72O76094 671 aaKnown RBP16.46■□□□□ 0.23
USB1-211ENST00000565662 CCDC175P0C221 793 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 NDUFS1P28331 727 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 CHRNA4P43681 627 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 NFATC2Q13469 925 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 C16orf72Q14CZ0 275 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 GPRC6AQ5T6X5 926 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 C4orf22Q6V702 233 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 USP53Q70EK8 1073 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 RTP4Q96DX8 246 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 ZDHHC12Q96GR4 267 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 LINC00615Q96LM1 132 aaPredicted RBP16.46■□□□□ 0.23
USB1-211ENST00000565662 RAB33BQ9H082 229 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 CRLS1Q9UJA2 301 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 PRKAB1Q9Y478 270 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 HEBP2Q9Y5Z4 205 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 SLC30A1Q9Y6M5 507 aa16.46■□□□□ 0.23
USB1-211ENST00000565662 AP3B1O00203 1094 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 DDX3YO15523 660 aaKnown RBP16.45■□□□□ 0.22
USB1-211ENST00000565662 UBXN7O94888 489 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 FTCDO95954 541 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 AGTP01019 485 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 AMD1P17707 334 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 CSF2RBP32927 897 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 FDFT1P37268 417 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 CHRNA6Q15825 494 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 BCL7AQ4VC05 210 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 MANEAQ5SRI9 462 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 ARHGAP22Q7Z5H3 698 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 SNX20Q7Z614 316 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 SFTPA2Q8IWL1 248 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 CARFQ8N187 725 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 TRIM58Q8NG06 486 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 OR4K2Q8NGD2 314 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 SLC35B2Q8TB61 432 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 CCDC110Q8TBZ0 833 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 NCSTNQ92542 709 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 USP7Q93009 1102 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.45■□□□□ 0.22
USB1-211ENST00000565662 TTC1Q99614 292 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 CCM2Q9BSQ5 444 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 DESI2Q9BSY9 194 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 ASB8Q9H765 288 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 PRDM8Q9NQV8 689 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 FBXO8Q9NRD0 319 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 EPHA6Q9UF33 1036 aa16.45■□□□□ 0.22
USB1-211ENST00000565662 PRAMEF33A0A0G2JMD5 474 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 AGAP14A8MT82 685 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 PRAMEF10O60809 474 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 AP2A1O95782 977 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 C9P02748 559 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 HGFP14210 728 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 ITIH1P19827 911 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 CAPZBP47756 277 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 ZNF574Q6ZN55 896 aaPredicted RBP16.44■□□□□ 0.22
USB1-211ENST00000565662 TMPRSS9Q7Z410 1059 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 C11orf96Q7Z7L8 435 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 FAM129CQ86XR2 697 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 ZNF547Q8IVP9 402 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 STYXQ8WUJ0 223 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 PEX13Q92968 403 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 CD180Q99467 661 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 COPS8Q99627 209 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 SLC39A1Q9NY26 324 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 DNAJC16Q9Y2G8 782 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 ARL5AQ9Y689 179 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 CAPN6Q9Y6Q1 641 aa16.44■□□□□ 0.22
USB1-211ENST00000565662 BPTFQ12830 3046 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 C17orf113A0A1B0GUU1 675 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 MGAT4DA6NG13 374 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 MATN2O00339 956 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 MTX2O75431 263 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 EML2O95834 649 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 ITGB2P05107 769 aa16.43■□□□□ 0.22
USB1-211ENST00000565662 PPARGP37231 505 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms