RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TIMM29Q9BSF4 260 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 VPS37BQ9H9H4 285 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 WHRNQ9P202 907 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 DNAJC16Q9Y2G8 782 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 PCDHGA1Q9Y5H4 931 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 RPS6KL1Q9Y6S9 549 aa15.75■□□□□ 0.11
RAB40C-208ENST00000564703 MYLKQ15746 1914 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 OR5K4A6NMS3 321 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 QSOX1O00391 747 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 NDUFS3O75489 264 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 TRIM16O95361 564 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 TTC4O95801 387 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 FTH1P19P0C7X4 201 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 FOXN2P32314 431 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 NSG1P42857 185 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 TTPAP49638 278 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 CLCNKAP51800 687 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 CAV1Q03135 178 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 THOC5Q13769 683 aaKnown RBP15.74■□□□□ 0.11
RAB40C-208ENST00000564703 DBN1Q16643 649 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 HIF1AQ16665 826 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 N4BP2L1Q5TBK1 243 aaPredicted RBP15.74■□□□□ 0.11
RAB40C-208ENST00000564703 ERMP1Q7Z2K6 904 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 SLC35F3Q8IY50 421 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 PIANPQ8IYJ0 282 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 ZNF669Q96BR6 464 aaPredicted RBP15.74■□□□□ 0.11
RAB40C-208ENST00000564703 LRRC39Q96DD0 335 aa15.74■□□□□ 0.11
RAB40C-208ENST00000564703 ARHGEF17Q96PE2 2063 aaPredicted RBP15.74■□□□□ 0.11
RAB40C-208ENST00000564703 COL5A1P20908 1838 aaPredicted RBP15.73■□□□□ 0.11
RAB40C-208ENST00000564703 CFAP54Q96N23 3096 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 TRBV23OR9-2A0A075B6M9 112 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 EME2A4GXA9 379 aaPredicted RBP15.73■□□□□ 0.11
RAB40C-208ENST00000564703 MGAT4DA6NG13 374 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 RHPN2P1A8MT19 583 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 RFPL3O75679 317 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 USP1O94782 785 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 AP2A2O94973 939 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 PRSS56P0CW18 603 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 MYF5P13349 255 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 PBLDP30039 288 aaPredicted RBP15.73■□□□□ 0.11
RAB40C-208ENST00000564703 MAGEA3P43357 314 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 CTSCP53634 463 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 DHX9Q08211 1270 aaKnown RBP15.73■□□□□ 0.11
RAB40C-208ENST00000564703 C14orf28Q4W4Y0 310 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 DUPD1Q68J44 220 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 KIAA0930Q6ICG6 404 aaPredicted RBP15.73■□□□□ 0.11
RAB40C-208ENST00000564703 TMEM135Q86UB9 458 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 SLCO6A1Q86UG4 719 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 ZNF547Q8IVP9 402 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 MMGT1Q8N4V1 131 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 BEND7Q8N7W2 519 aaPredicted RBP15.73■□□□□ 0.11
RAB40C-208ENST00000564703 GPR156Q8NFN8 814 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 CALML6Q8TD86 181 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 EBNA1BP2Q99848 306 aaKnown RBP15.73■□□□□ 0.11
RAB40C-208ENST00000564703 CCM2Q9BSQ5 444 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 LRRC1Q9BTT6 524 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 STN1Q9H668 368 aaKnown RBP15.73■□□□□ 0.11
RAB40C-208ENST00000564703 SLC23A2Q9UGH3 650 aa15.73■□□□□ 0.11
RAB40C-208ENST00000564703 PCYT1BQ9Y5K3 369 aaPredicted RBP15.73■□□□□ 0.11
RAB40C-208ENST00000564703 ZNF106Q9H2Y7 1883 aaKnown RBP15.73■□□□□ 0.11
RAB40C-208ENST00000564703 IGLV3-16A0A075B6K0 115 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 PDZK1P1A8MUH7 402 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 GP1BAP07359 652 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 OR56A5P0C7T3 313 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 GLB1P16278 677 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 PGAM1P18669 254 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 HALP42357 657 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 ACADVLP49748 655 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 DRG2P55039 364 aaKnown RBP15.72■□□□□ 0.11
RAB40C-208ENST00000564703 B4GALNT1Q00973 533 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 SLC7A5Q01650 507 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 LONRF1Q17RB8 773 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 BCL7AQ4VC05 210 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 GLE1Q53GS7 698 aaKnown RBP15.72■□□□□ 0.11
RAB40C-208ENST00000564703 NEPROQ6NW34 567 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 IYDQ6PHW0 289 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 CENPUQ71F23 418 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 EFL1Q7Z2Z2 1120 aaKnown RBP15.72■□□□□ 0.11
RAB40C-208ENST00000564703 SLC9B2Q86UD5 537 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 PNPLA1Q8N8W4 532 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 AVL9Q8NBF6 648 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 KYQ8NBH2 561 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.72■□□□□ 0.11
RAB40C-208ENST00000564703 OR2L2Q8NH16 312 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 IFI44Q8TCB0 444 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 MAPK15Q8TD08 544 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 TCF12Q99081 682 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 TSSK1BQ9BXA7 367 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 C20orf96Q9NUD7 363 aaPredicted RBP15.72■□□□□ 0.11
RAB40C-208ENST00000564703 LRIT1Q9P2V4 623 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 TBC1D29Q9UFV1 150 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 ST14Q9Y5Y6 855 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 FAM169AQ9Y6X4 670 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 PLXNB3Q9ULL4 1909 aa15.72■□□□□ 0.11
RAB40C-208ENST00000564703 KIR2DS5A0A0G2JLQ3 304 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 A0A0G2JNG1 304 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 C17orf113A0A1B0GUU1 675 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 KIR2DS3K7RE56 304 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 NOBOXO60393 691 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 FTH1P02794 183 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms