RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TDRPQ86YL5 185 aa4.07□□□□□ -1.76
CHD9-212ENST00000564641 ZNF248Q8NDW4 579 aa4.07□□□□□ -1.76
CHD9-212ENST00000564641 THAP6Q8TBB0 222 aa4.07□□□□□ -1.76
CHD9-212ENST00000564641 SKA1Q96BD8 255 aa4.07□□□□□ -1.76
CHD9-212ENST00000564641 ZNF524Q96C55 264 aa4.07□□□□□ -1.76
CHD9-212ENST00000564641 PDCL3Q9H2J4 239 aa4.07□□□□□ -1.76
CHD9-212ENST00000564641 RIC8AQ9NPQ8 531 aa4.07□□□□□ -1.76
CHD9-212ENST00000564641 MAP3K20Q9NYL2 800 aaKnown RBP4.07□□□□□ -1.76
CHD9-212ENST00000564641 RRN3Q9NYV6 651 aa4.07□□□□□ -1.76
CHD9-212ENST00000564641 MPP6Q9NZW5 540 aa4.07□□□□□ -1.76
CHD9-212ENST00000564641 SLC25A10Q9UBX3 287 aaPredicted RBP4.07□□□□□ -1.76
CHD9-212ENST00000564641 PLCH1Q4KWH8 1693 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 LRP5O75197 1615 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 TULP4Q9NRJ4 1543 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 CENPJQ9HC77 1338 aaPredicted RBP4.06□□□□□ -1.76
CHD9-212ENST00000564641 TEX13CA0A0J9YWL9 993 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 J3KRW8 73 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 SPINT2O43291 252 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 CAVIN2O95810 425 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 TBX6O95947 436 aaPredicted RBP4.06□□□□□ -1.76
CHD9-212ENST00000564641 IGHV4-39P01824 125 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 TPM2P07951 284 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 FAM106CPP0CH98 169 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 GEMIN4P57678 1058 aaKnown RBP4.06□□□□□ -1.76
CHD9-212ENST00000564641 LMOD3Q0VAK6 560 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 USP41Q3LFD5 358 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 C6orf141Q5SZD1 244 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 ARHGAP17Q68EM7 881 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 SLC22A25Q6T423 547 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 CACNA2D4Q7Z3S7 1137 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 SPEM1Q8N4L4 309 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 PCDH20Q8N6Y1 951 aaKnown RBP4.06□□□□□ -1.76
CHD9-212ENST00000564641 ADAD2Q8NCV1 583 aaKnown RBP4.06□□□□□ -1.76
CHD9-212ENST00000564641 HERVK_113Q902F9 699 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 TM9SF4Q92544 642 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 ZHX3Q9H4I2 956 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 UPF2Q9HAU5 1272 aaKnown RBP4.06□□□□□ -1.76
CHD9-212ENST00000564641 WASH6PQ9NQA3 447 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 RRAGDQ9NQL2 400 aaPredicted RBP4.06□□□□□ -1.76
CHD9-212ENST00000564641 OGFRQ9NZT2 677 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.06□□□□□ -1.76
CHD9-212ENST00000564641 SLC13A4Q9UKG4 626 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 HSF4Q9ULV5 492 aa4.06□□□□□ -1.76
CHD9-212ENST00000564641 DISP2A7MBM2 1401 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 IGKV3D-20A0A0C4DH25 116 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 CTAGE9A4FU28 777 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 USP17L23D6RBM5 183 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 EPB41L2O43491 1005 aaKnown RBP4.05□□□□□ -1.76
CHD9-212ENST00000564641 AGR2O95994 175 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 CTAGE8P0CG41 777 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 POLR2CP19387 275 aaPredicted RBP4.05□□□□□ -1.76
CHD9-212ENST00000564641 UFM1P61960 85 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 CCDC96Q2M329 555 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 MYLK3Q32MK0 819 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 STXBP5Q5T5C0 1151 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 SIGIRRQ6IA17 410 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 PLEKHM3Q6ZWE6 761 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 CTAGE4Q8IX94 777 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 DNAAF4Q8WXU2 420 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 ASCL2Q99929 193 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 FUZQ9BT04 418 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 HEMGNQ9BXL5 484 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 PRDM4Q9UKN5 801 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 NAP1L2Q9ULW6 460 aaPredicted RBP4.05□□□□□ -1.76
CHD9-212ENST00000564641 KAT6BQ8WYB5 2073 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 GLI3P10071 1580 aa4.05□□□□□ -1.76
CHD9-212ENST00000564641 ITIH6Q6UXX5 1313 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 RRN3P2A6NIE6 340 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 EIF3FO00303 357 aaPredicted RBP4.04□□□□□ -1.76
CHD9-212ENST00000564641 PRKNO60260 465 aaPredicted RBP4.04□□□□□ -1.76
CHD9-212ENST00000564641 FTCDO95954 541 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 RXRGP48443 463 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 GNAQP50148 359 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 EIF5P55010 431 aaKnown RBP4.04□□□□□ -1.76
CHD9-212ENST00000564641 ISL1P61371 349 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 TLE2Q04725 743 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 GRIK2Q13002 908 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 WDR78Q5VTH9 848 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 FAM171BQ6P995 826 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 ATF7IPQ6VMQ6 1270 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 GPR180Q86V85 440 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 LRRTM4Q86VH4 590 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 HCAR2Q8TDS4 363 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 TAAR8Q969N4 342 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 ORAI1Q96D31 301 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 STAMBPL1Q96FJ0 436 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 ZNF354BQ96LW1 612 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 TTYH1Q9H313 450 aaPredicted RBP4.04□□□□□ -1.76
CHD9-212ENST00000564641 AAR2Q9Y312 384 aaKnown RBP4.04□□□□□ -1.76
CHD9-212ENST00000564641 CEPT1Q9Y6K0 416 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 BRWD3Q6RI45 1802 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 RGPD8O14715 1765 aaPredicted RBP4.04□□□□□ -1.76
CHD9-212ENST00000564641 ABCA3Q99758 1704 aa4.04□□□□□ -1.76
CHD9-212ENST00000564641 RAB3GAP2Q9H2M9 1393 aa4.03□□□□□ -1.76
CHD9-212ENST00000564641 NINLQ9Y2I6 1382 aa4.03□□□□□ -1.76
CHD9-212ENST00000564641 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
CHD9-212ENST00000564641 TSPAN4O14817 238 aa4.03□□□□□ -1.76
CHD9-212ENST00000564641 AHRP35869 848 aa4.03□□□□□ -1.76
CHD9-212ENST00000564641 DCTP40126 519 aa4.03□□□□□ -1.76
CHD9-212ENST00000564641 AMPHP49418 695 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms