RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 ZNF781Q8N8C0 355 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 GIMAP7Q8NHV1 300 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 CXorf40AQ8TE69 158 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 FUBP1Q96AE4 644 aaKnown RBP15.36■□□□□ 0.05
COMMD4-210ENST00000564587 SKA1Q96BD8 255 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 FAM136AQ96C01 138 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 ERP27Q96DN0 273 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 RILPQ96NA2 401 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 TMEM237Q96Q45 408 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 RIOK2Q9BVS4 552 aaKnown RBP15.36■□□□□ 0.05
COMMD4-210ENST00000564587 C1QTNF3Q9BXJ4 246 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 ZCCHC2Q9C0B9 1178 aaKnown RBP15.36■□□□□ 0.05
COMMD4-210ENST00000564587 EPHX3Q9H6B9 360 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 PNPOQ9NVS9 261 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 MARCOQ9UEW3 520 aaPredicted RBP15.36■□□□□ 0.05
COMMD4-210ENST00000564587 HCN2Q9UL51 889 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 PRSS21Q9Y6M0 314 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 PLXNB3Q9ULL4 1909 aa15.36■□□□□ 0.05
COMMD4-210ENST00000564587 EYSQ5T1H1 3165 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 SPTBN5Q9NRC6 3674 aaKnown RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 TRPC5OSA6NMA1 111 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 MATN2O00339 956 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 RAD51BO15315 384 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 SNX2O60749 519 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 S100BP04271 92 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 SERPINA6P08185 405 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 MTHFD2P13995 350 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 NTSR1P30989 418 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 CTHP32929 405 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 KIR2DL1P43626 348 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 KCNC1P48547 511 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 RASSF2P50749 326 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 ALDH18A1P54886 795 aaKnown RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 SFSWAPQ12872 951 aaKnown RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 TSNQ15631 228 aaKnown RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 AAK1Q2M2I8 961 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 POM121L1PQ3SYA9 428 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 CDKL4Q5MAI5 379 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 PLEKHS1Q5SXH7 462 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 SEL1L3Q68CR1 1132 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 ANKS6Q68DC2 871 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 ZNF776Q68DI1 518 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 NAIF1Q69YI7 327 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 RFLNAQ6ZTI6 216 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 FRA10AC1Q70Z53 315 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 MTDHQ86UE4 582 aaKnown RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 CLDN19Q8N6F1 224 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 PTGR2Q8N8N7 351 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 OR2T3Q8NH03 318 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 GLYATL1Q969I3 302 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 NUS1Q96E22 293 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 PHF21BQ96EK2 531 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 GUCD1Q96NT3 240 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 SLC30A3Q99726 388 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 FAM126AQ9BYI3 521 aaPredicted RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 MYLK2Q9H1R3 596 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 CYP4F12Q9HCS2 524 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 MRGBPQ9NV56 204 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 GALPQ9UBC7 116 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 CD84Q9UIB8 345 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 SLC12A4Q9UP95 1085 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 TNPO3Q9Y5L0 923 aaKnown RBP15.35■□□□□ 0.05
COMMD4-210ENST00000564587 FADS3Q9Y5Q0 445 aa15.35■□□□□ 0.05
COMMD4-210ENST00000564587 CKAP5Q14008 2032 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 NPEPPSL1A6NEC2 478 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 NEMP2A6NFY4 417 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 IQCF5A8MTL0 148 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 K7EQS6 105 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 UBXN8O00124 270 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 CDC7O00311 574 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 SUPT7LO94864 414 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 GSTM1P09488 218 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 MPC1LP0DKB6 136 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 KCNA5P22460 613 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 SERPINB3P29508 390 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 ARRB2P32121 409 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 CA5AP35218 305 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 P2RY2P41231 377 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 MAPK9P45984 424 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 SCTRP47872 440 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 MRPS21P82921 87 aaKnown RBP15.34■□□□□ 0.05
COMMD4-210ENST00000564587 SATB1Q01826 763 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 GSTM4Q03013 218 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 GRSF1Q12849 480 aaKnown RBP eCLIP15.34■□□□□ 0.05
COMMD4-210ENST00000564587 KRT72Q14CN4 511 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 CST6Q15828 149 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 PFKFB4Q16877 469 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 HSF5Q4G112 596 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-210ENST00000564587 METTL2BQ6P1Q9 378 aaKnown RBP15.34■□□□□ 0.05
COMMD4-210ENST00000564587 TTC23LQ6PF05 361 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 EPGNQ6UW88 154 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 NEK10Q6ZWH5 1172 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 CLNKQ7Z7G1 428 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 PHYKPLQ8IUZ5 450 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 SFTPA1Q8IWL2 248 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 LSMEM2Q8N112 164 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 SCAMP4Q969E2 229 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 ACOX2Q99424 681 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 GABRG3Q99928 467 aa15.34■□□□□ 0.05
COMMD4-210ENST00000564587 WRAP53Q9BUR4 548 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms