RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 SLC13A1Q9BZW2 595 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 TSPYL1Q9H0U9 437 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 RMI1Q9H9A7 625 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 TRNAU1APQ9NX07 287 aaKnown RBP12.3□□□□□ -0.44
KARS-204ENST00000564578 SLC17A6Q9P2U8 582 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 ZNHIT2Q9UHR6 403 aa12.3□□□□□ -0.44
KARS-204ENST00000564578 PCDHGA12O60330 932 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 FOXD2O60548 495 aaPredicted RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 TNFP01375 233 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 ZNF883P0CG24 379 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 MSH3P20585 1137 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 GABRB3P28472 473 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 NSG1P42857 185 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 SLC1A2P43004 574 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 TTPAP49638 278 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 AARS2Q5JTZ9 985 aaKnown RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 LYPLAL1Q5VWZ2 237 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 CRTC3Q6UUV7 619 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 XKR5Q6UX68 686 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 CYS1Q717R9 158 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 CHST15Q7LFX5 561 aaPredicted RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 GPR161Q8N6U8 529 aaKnown RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 BEND7Q8N7W2 519 aaPredicted RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 GPBAR1Q8TDU6 330 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 LPGAT1Q92604 370 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 BIRC8Q96P09 236 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 TCF12Q99081 682 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 TXLNGYQ9BZA5 131 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 ZCCHC2Q9C0B9 1178 aaKnown RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 P2RY12Q9H244 342 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 SMYD2Q9NRG4 433 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 IARS2Q9NSE4 1012 aaKnown RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 NINJ2Q9NZG7 142 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 GPR34Q9UPC5 381 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 GOLGA4Q13439 2230 aaKnown RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 PRR19A6NJB7 356 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 C4orf47A7E2U8 309 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 AQP9O43315 295 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 OGNP20774 298 aaKnown RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 AK4P27144 223 aaPredicted RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 PMLP29590 882 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 CCT8P50990 548 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 CTBSQ01459 385 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 THOC5Q13769 683 aaKnown RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 AASDHQ4L235 1098 aaPredicted RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 WDR93Q6P2C0 686 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 TMEM220Q6QAJ8 160 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 LRRTM4Q86VH4 590 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 GALNT13Q8IUC8 556 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 TRAPPC5Q8IUR0 188 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 LMNTD2Q8IXW0 634 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 KIAA2013Q8IYS2 634 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 HEXDCQ8WVB3 486 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.29□□□□□ -0.44
KARS-204ENST00000564578 DCUN1D1Q96GG9 259 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 OR2M4Q96R27 311 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 CDC42EP4Q9H3Q1 356 aaKnown RBP12.29□□□□□ -0.44
KARS-204ENST00000564578 TMEM9BQ9NQ34 198 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 FBXO5Q9UKT4 447 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 GPSM3Q9Y4H4 160 aa12.29□□□□□ -0.44
KARS-204ENST00000564578 PIKFYVEQ9Y2I7 2098 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 CXorf49A8MYA2 514 aaPredicted RBP12.28□□□□□ -0.44
KARS-204ENST00000564578 HAUS5O94927 633 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 AHSGP02765 367 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 RALBP11234 206 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 ACP5P13686 325 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 CD59P13987 128 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 PRLHRP49683 370 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 ADARP55265 1226 aaKnown RBP12.28□□□□□ -0.44
KARS-204ENST00000564578 MPP1Q00013 466 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 ZNF658BQ4V348 819 aaPredicted RBP12.28□□□□□ -0.44
KARS-204ENST00000564578 BCL7AQ4VC05 210 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 SDCCAG8Q86SQ7 713 aaPredicted RBP12.28□□□□□ -0.44
KARS-204ENST00000564578 C2CD4AQ8NCU7 369 aaPredicted RBP12.28□□□□□ -0.44
KARS-204ENST00000564578 CALML6Q8TD86 181 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 LMX1AQ8TE12 382 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 ZNF514Q96K75 400 aaPredicted RBP12.28□□□□□ -0.44
KARS-204ENST00000564578 TTC1Q99614 292 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 FAM167BQ9BTA0 163 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 PARD6BQ9BYG5 372 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 PPANQ9NQ55 473 aaKnown RBP12.28□□□□□ -0.44
KARS-204ENST00000564578 SPASTQ9UBP0 616 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 CRYL1Q9Y2S2 319 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 PSAT1Q9Y617 370 aa12.28□□□□□ -0.44
KARS-204ENST00000564578 ARHGEF17Q96PE2 2063 aaPredicted RBP12.28□□□□□ -0.44
KARS-204ENST00000564578 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.27□□□□□ -0.44
KARS-204ENST00000564578 CFAP99D6REC4 459 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 LMO7DNF2Z398 122 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 H3BM21 787 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 PRMT5O14744 637 aaPredicted RBP12.27□□□□□ -0.44
KARS-204ENST00000564578 KMOO15229 486 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 YY2O15391 372 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 YKT6O15498 198 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 NDUFS3O75489 264 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 POP7O75817 140 aaKnown RBP12.27□□□□□ -0.44
KARS-204ENST00000564578 GSTA2P09210 222 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 CTSEP14091 401 aa12.27□□□□□ -0.44
KARS-204ENST00000564578 ZNF7P17097 686 aaPredicted RBP12.27□□□□□ -0.44
KARS-204ENST00000564578 LEPRP48357 1165 aaKnown RBP12.27□□□□□ -0.44
KARS-204ENST00000564578 MGAT5Q09328 741 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms