RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 ZSCAN26Q16670 478 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 HNRNPA1L2Q32P51 320 aaKnown RBP9.66□□□□□ -0.86
UBFD1-203ENST00000564106 GLIPR1L2Q4G1C9 344 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 ZNF805Q5CZA5 627 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 C9orf64Q5T6V5 341 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 AGAP9Q5VTM2 703 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 CMC1Q7Z7K0 106 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 CLEC14AQ86T13 490 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 SLCO6A1Q86UG4 719 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 NUDCD3Q8IVD9 361 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 CACNA2D3Q8IZS8 1091 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 AADATQ8N5Z0 425 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 PNPLA1Q8N8W4 532 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 ARMC2Q8NEN0 867 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 PPP1R14CQ8TAE6 165 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 OR8D1Q8WZ84 308 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 ZNF75CPQ92670 426 aaPredicted RBP9.66□□□□□ -0.86
UBFD1-203ENST00000564106 BIRC7Q96CA5 298 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 CCDC126Q96EE4 140 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 PLEKHG4BQ96PX9 1271 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 FAM129BQ96TA1 746 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 PITPNM3Q9BZ71 974 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 FAM107BQ9H098 131 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 MANSC1Q9H8J5 431 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 SYTL2Q9HCH5 934 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 TOR4AQ9NXH8 423 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 PKD2L2Q9NZM6 624 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 SIRPGQ9P1W8 387 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.66□□□□□ -0.86
UBFD1-203ENST00000564106 KCTD3Q9Y597 815 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 PCDHB1Q9Y5F3 818 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 ANKRD11Q6UB99 2663 aaPredicted RBP9.66□□□□□ -0.86
UBFD1-203ENST00000564106 BPTFQ12830 3046 aa9.66□□□□□ -0.86
UBFD1-203ENST00000564106 GLYATL1P3A0A0U1RQE8 302 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 RGSL1A5PLK6 1076 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 UPK3BL1B0FP48 263 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 UPK3BL2E5RIL1 263 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 F8W8V4 182 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 H3BMM5 538 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 AURKAO14965 403 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 MID1O15344 667 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 BUD23O43709 281 aaKnown RBP9.65□□□□□ -0.86
UBFD1-203ENST00000564106 EDF1O60869 148 aaKnown RBP9.65□□□□□ -0.86
UBFD1-203ENST00000564106 VPS26AO75436 327 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 SNUPNO95149 360 aaKnown RBP9.65□□□□□ -0.86
UBFD1-203ENST00000564106 KLHL2O95198 593 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 ESR1P03372 595 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 PROCP04070 461 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 CAPNS1P04632 268 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 BPGMP07738 259 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 SLC35E2BP0CK96 405 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 TROVE2P10155 538 aaKnown RBP eCLIP9.65□□□□□ -0.86
UBFD1-203ENST00000564106 ZNF7P17097 686 aaPredicted RBP9.65□□□□□ -0.86
UBFD1-203ENST00000564106 CTPS1P17812 591 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 SAT1P21673 171 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 GRK2P25098 689 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 GABRB3P28472 473 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 ELP6Q0PNE2 266 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 KIF19Q2TAC6 998 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 ZRANB3Q5FWF4 1079 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 PRAMEF14Q5SWL7 426 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 HECTD2Q5U5R9 776 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 UGT3A1Q6NUS8 523 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 ERAP2Q6P179 960 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 CNSTQ6PJW8 725 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 UNQ6494/PRO21346Q6UXR6 183 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 CDHR3Q6ZTQ4 885 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 SNX20Q7Z614 316 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 LRRC34Q8IZ02 419 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 RBFAQ8N0V3 343 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 CHCHD4Q8N4Q1 142 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 CCDC197Q8NCU1 140 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 TMIEQ8NEW7 156 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 CEP76Q8TAP6 659 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 GRIN3AQ8TCU5 1115 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 DTX3LQ8TDB6 740 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 ULK4Q96C45 1275 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 KLHL32Q96NJ5 620 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 OMDQ99983 421 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 RSPH9Q9H1X1 276 aaPredicted RBP9.65□□□□□ -0.86
UBFD1-203ENST00000564106 FAM96AQ9H5X1 160 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 SUDS3Q9H7L9 328 aaPredicted RBP9.65□□□□□ -0.86
UBFD1-203ENST00000564106 CAB39LQ9H9S4 337 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 NMRAL1Q9HBL8 299 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 GPAMQ9HCL2 828 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 TM9SF3Q9HD45 589 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 FGFR1OP2Q9NVK5 253 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 TAS2R13Q9NYV9 303 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 MARCH4Q9P2E8 410 aaPredicted RBP9.65□□□□□ -0.86
UBFD1-203ENST00000564106 NFKBIL1Q9UBC1 381 aaPredicted RBP9.65□□□□□ -0.86
UBFD1-203ENST00000564106 COPG2Q9UBF2 871 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 SUN2Q9UH99 717 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 FKBPLQ9UIM3 349 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 VWA7Q9Y334 891 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 SNX11Q9Y5W9 270 aa9.65□□□□□ -0.86
UBFD1-203ENST00000564106 NBEAQ8NFP9 2946 aa9.65□□□□□ -0.87
UBFD1-203ENST00000564106 APC2O95996 2303 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 A0A1B0GTW7 788 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 A0A1W2PP55 124 aa9.64□□□□□ -0.87
UBFD1-203ENST00000564106 UBA6A0AVT1 1052 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms