RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 NFATC4Q14934 902 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 FAM83EQ2M2I3 478 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 WDR45BQ5MNZ6 344 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 DOK6Q6PKX4 331 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 DET1Q7L5Y6 550 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 OTOAQ7RTW8 1153 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 BMP8AQ7Z5Y6 402 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 TRIM74Q86UV6 250 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 PELI3Q8N2H9 469 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 NKAPQ8N5F7 415 aaKnown RBP12.65□□□□□ -0.38
CLK3-214ENST00000564096 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.38
CLK3-214ENST00000564096 ZBTB2Q8N680 514 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 CLDN19Q8N6F1 224 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 TMEM105Q8N8V8 129 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 DTWD2Q8NBA8 298 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 TMEM145Q8NBT3 493 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 BIRC7Q96CA5 298 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 GPR21Q99679 349 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 OLFM1Q99784 485 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 OR2AG1Q9H205 316 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 SARS2Q9NP81 518 aaKnown RBP12.65□□□□□ -0.38
CLK3-214ENST00000564096 KCNK9Q9NPC2 374 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 KLHL42Q9P2K6 505 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 MID2Q9UJV3 735 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 CNOT6Q9ULM6 557 aaKnown RBP12.65□□□□□ -0.38
CLK3-214ENST00000564096 OR1A2Q9Y585 309 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 HS3ST3A1Q9Y663 406 aa12.65□□□□□ -0.38
CLK3-214ENST00000564096 OAS3Q9Y6K5 1087 aaKnown RBP12.65□□□□□ -0.38
CLK3-214ENST00000564096 ATG2BQ96BY7 2078 aa12.65□□□□□ -0.39
CLK3-214ENST00000564096 OR2AG2A6NM03 316 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 METTL12A8MUP2 240 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 C10orf142B7Z368 130 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 EIF3FO00303 357 aaPredicted RBP12.64□□□□□ -0.39
CLK3-214ENST00000564096 TM9SF1O15321 606 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 C2P06681 752 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 APOA4P06727 396 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 SLC35E2BP0CK96 405 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 ENO3P13929 434 aaPredicted RBP12.64□□□□□ -0.39
CLK3-214ENST00000564096 VCLP18206 1134 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 CA5AP35218 305 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 SLC18A1P54219 525 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 CSTF1Q05048 431 aaKnown RBP12.64□□□□□ -0.39
CLK3-214ENST00000564096 PDE1CQ14123 709 aaPredicted RBP12.64□□□□□ -0.39
CLK3-214ENST00000564096 PTK2BQ14289 1009 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 INSCQ1MX18 579 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 AGAP9Q5VTM2 703 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 GCNT7Q6ZNI0 430 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 LPCAT2Q7L5N7 544 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 ADGRG6Q86SQ4 1221 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 PIM3Q86V86 326 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 LRRTM4Q86VH4 590 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 CEP97Q8IW35 865 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 PNPLA1Q8N8W4 532 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 RASGEF1AQ8N9B8 481 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 BANPQ8N9N5 519 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 SIDT2Q8NBJ9 832 aaKnown RBP12.64□□□□□ -0.39
CLK3-214ENST00000564096 CD200R1Q8TD46 325 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 INPP5DQ92835 1189 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 FUBP1Q96AE4 644 aaKnown RBP12.64□□□□□ -0.39
CLK3-214ENST00000564096 HSPA12BQ96MM6 686 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 WDR92Q96MX6 357 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 APOOQ9BUR5 198 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 SLC13A1Q9BZW2 595 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 AASDHPPTQ9NRN7 309 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 DCDC2Q9UHG0 476 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 GPR34Q9UPC5 381 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 PRSS21Q9Y6M0 314 aa12.64□□□□□ -0.39
CLK3-214ENST00000564096 TMEM120BA0PK00 339 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 CCDC189A1A4V9 331 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 NUAK1O60285 661 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 DNAJC6O75061 913 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 LTA4HP09960 611 aaKnown RBP12.63□□□□□ -0.39
CLK3-214ENST00000564096 CBSLP0DN79 551 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 TDGF1P13385 188 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 ITGB6P18564 788 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 DGKAP23743 735 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 CRHR1P34998 444 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 CBSP35520 551 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 MAPK9P45984 424 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 FNTBP49356 437 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 CSRP3P50461 194 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 CLCN7P51798 805 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 IL2P60568 153 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 PFN3P60673 137 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 ATP6V0D1P61421 351 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 PLOD1Q02809 727 aaPredicted RBP12.63□□□□□ -0.39
CLK3-214ENST00000564096 OVGP1Q12889 678 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 BOP1Q14137 746 aaKnown RBP12.63□□□□□ -0.39
CLK3-214ENST00000564096 ZNF460Q14592 562 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 CCDC153Q494R4 210 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 KHDC1Q4VXA5 237 aaKnown RBP12.63□□□□□ -0.39
CLK3-214ENST00000564096 TMEM220Q6QAJ8 160 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 TSSK4Q6SA08 328 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 CRTC3Q6UUV7 619 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 ABI3BPQ7Z7G0 1075 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 GALNT13Q8IUC8 556 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 MYO1HQ8N1T3 1032 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 ACVR1CQ8NER5 493 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 HM13Q8TCT9 377 aa12.63□□□□□ -0.39
CLK3-214ENST00000564096 ELMO1Q92556 727 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms