RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ANKRD12Q6UB98 2062 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 SSU72P8A0A1W2PR75 194 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 ZNF185O15231 689 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 DPM1O60762 260 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 MTX2O75431 263 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 RASSF9O75901 435 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 TMEM63AO94886 807 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 MBD3O95983 291 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 JCHAINP01591 159 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 MT-ND3P03897 115 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 HLA-DQB2P05538 268 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 PYGLP06737 847 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 CCNYL3P0C7X3 344 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 SLC2A4P14672 509 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 ZNF7P17097 686 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-204ENST00000563739 RPL10P27635 214 aaKnown RBP10.15□□□□□ -0.78
SF3B3-204ENST00000563739 NOP2P46087 812 aaKnown RBP10.15□□□□□ -0.78
SF3B3-204ENST00000563739 DRG2P55039 364 aaKnown RBP10.15□□□□□ -0.78
SF3B3-204ENST00000563739 AGAP9Q5VTM2 703 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 IRGCQ6NXR0 463 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 WASH2PQ6VEQ5 465 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 SPOCD1Q6ZMY3 1216 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 FAM83HQ6ZRV2 1179 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-204ENST00000563739 CPNE8Q86YQ8 564 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 PHYKPLQ8IUZ5 450 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 PSTKQ8IV42 348 aaKnown RBP10.15□□□□□ -0.78
SF3B3-204ENST00000563739 DSELQ8IZU8 1212 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 D2HGDHQ8N465 521 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 LPCAT1Q8NF37 534 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 C5orf34Q96MH7 638 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 FCRL4Q96PJ5 515 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 TRIB3Q96RU7 358 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 TIMM29Q9BSF4 260 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 SLC29A3Q9BZD2 475 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 OSGEPL1Q9H4B0 414 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 PCDH18Q9HCL0 1135 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 WASH6PQ9NQA3 447 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 FGF21Q9NSA1 209 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 NFKBIL1Q9UBC1 381 aaPredicted RBP10.15□□□□□ -0.78
SF3B3-204ENST00000563739 RARRES3Q9UL19 164 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 ENTPD4Q9Y227 616 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 DNAJC16Q9Y2G8 782 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 PCDHGA10Q9Y5H3 936 aa10.15□□□□□ -0.78
SF3B3-204ENST00000563739 C1orf232A0A0U1RR37 186 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 ARHGAP10A1A4S6 786 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 ANKUB1A6NFN9 424 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 DDX3YO15523 660 aaKnown RBP10.14□□□□□ -0.79
SF3B3-204ENST00000563739 DAPK3O43293 454 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 CPNE3O75131 537 aaKnown RBP10.14□□□□□ -0.79
SF3B3-204ENST00000563739 CNOT3O75175 753 aaKnown RBP10.14□□□□□ -0.79
SF3B3-204ENST00000563739 LCA5LO95447 670 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 VIPP01282 170 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 CD48P09326 243 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 AMD1P17707 334 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 EEF1GP26641 437 aaKnown RBP10.14□□□□□ -0.79
SF3B3-204ENST00000563739 ARSEP51690 589 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 CDH6P55285 790 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 FOXL2P58012 376 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 SLC25A11Q02978 314 aaKnown RBP10.14□□□□□ -0.79
SF3B3-204ENST00000563739 MMRN1Q13201 1228 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 SYCP1Q15431 976 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 ANO6Q4KMQ2 910 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 MARC1Q5VT66 337 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 DCUN1D2Q6PH85 259 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 IRF2BP2Q7Z5L9 587 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 CUZD1Q86UP6 607 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 ATPAF2Q8N5M1 289 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 SIDT2Q8NBJ9 832 aaKnown RBP10.14□□□□□ -0.79
SF3B3-204ENST00000563739 TTC13Q8NBP0 860 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 LRFN5Q96NI6 719 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 NRTNQ99748 197 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 FAM83DQ9H4H8 585 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 SLAMF7Q9NQ25 335 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 PCMTD2Q9NV79 361 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 TCFL5Q9UL49 500 aa10.14□□□□□ -0.79
SF3B3-204ENST00000563739 A6NL46 340 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 PDZK1P1A8MUH7 402 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 PES1O00541 588 aaKnown RBP10.13□□□□□ -0.79
SF3B3-204ENST00000563739 GPR39O43194 453 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 SCRG1O75711 98 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 RAB40ALP0C0E4 278 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 RARAP10276 462 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 ATP1A3P13637 1013 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 FECHP22830 423 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 KPNA2P52292 529 aaKnown RBP10.13□□□□□ -0.79
SF3B3-204ENST00000563739 VAV2P52735 878 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 DCDC1P59894 354 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 GALNT2Q10471 571 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 ALS2CLQ60I27 953 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 NCBP2-AS2Q69YL0 99 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 DUS1LQ6P1R4 473 aaKnown RBP10.13□□□□□ -0.79
SF3B3-204ENST00000563739 TMCO3Q6UWJ1 677 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 RHOT1Q8IXI2 618 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.13□□□□□ -0.79
SF3B3-204ENST00000563739 AVL9Q8NBF6 648 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 FAM71BQ8TC56 605 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 SEC14L1Q92503 715 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 UBXN4Q92575 508 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 GLYATL1Q969I3 302 aa10.13□□□□□ -0.79
SF3B3-204ENST00000563739 MLPHQ9BV36 600 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms