RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 FRMD3A2A2Y4 597 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 TMEM202A6NGA9 273 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 ENTPD3O75355 529 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 DAB1O75553 588 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 EPN2O95208 641 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 PSG1P11464 419 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 PORP16435 677 aaPredicted RBP3.77□□□□□ -1.81
HERC1-215ENST00000561436 CDC25AP30304 524 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 GCH1P30793 250 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 RAD52P43351 418 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 FSCBQ5H9T9 825 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 ASPHD1Q5U4P2 390 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 NUGGCQ68CJ6 796 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 METTL2BQ6P1Q9 378 aaKnown RBP3.77□□□□□ -1.81
HERC1-215ENST00000561436 TMCO3Q6UWJ1 677 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 COLCA1Q6ZS62 124 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 Q6ZTK2 550 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 ENOSF1Q7L5Y1 443 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 WDR63Q8IWG1 891 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 RNF168Q8IYW5 571 aaPredicted RBP3.77□□□□□ -1.81
HERC1-215ENST00000561436 DSELQ8IZU8 1212 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 DEFB123Q8N688 67 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 MIGA1Q8NAN2 632 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 ENGASEQ8NFI3 743 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 SAT2Q96F10 170 aaPredicted RBP3.77□□□□□ -1.81
HERC1-215ENST00000561436 RRNAD1Q96FB5 475 aaKnown RBP3.77□□□□□ -1.81
HERC1-215ENST00000561436 METTL2AQ96IZ6 378 aaKnown RBP3.77□□□□□ -1.81
HERC1-215ENST00000561436 SLC41A2Q96JW4 573 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 SH3GL2Q99962 352 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 MXD3Q9BW11 206 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 NDST4Q9H3R1 872 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 TDRD3Q9H7E2 651 aaKnown RBP3.77□□□□□ -1.81
HERC1-215ENST00000561436 SLC28A3Q9HAS3 691 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 GPR108Q9NPR9 543 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 HIF1ANQ9NWT6 349 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 OR6C3Q9NZP0 311 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 OGFRQ9NZT2 677 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 CWC15Q9P013 229 aaKnown RBP3.77□□□□□ -1.81
HERC1-215ENST00000561436 RPS6KA6Q9UK32 745 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 FZD10Q9ULW2 581 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 CEPT1Q9Y6K0 416 aa3.77□□□□□ -1.81
HERC1-215ENST00000561436 AFDNP55196 1824 aaKnown RBP3.77□□□□□ -1.81
HERC1-215ENST00000561436 A0A1W2PQF6 199 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 SYNDIG1LA6NDD5 238 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 AGAP14A8MT82 685 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 CDRT15L2A8MXV6 281 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 AHCYL1O43865 530 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 KLK8O60259 260 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 NTN1O95631 604 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 NAGAP17050 411 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 TNFRSF1BP20333 461 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 HOXA13P31271 388 aaPredicted RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 ACTN2P35609 894 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 RPL3P39023 403 aaKnown RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 NNMTP40261 264 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 EIF2DP41214 584 aaKnown RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 PRCPP42785 496 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 CAMPP49913 170 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 GALCP54803 685 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 P2RX3P56373 397 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 ADORA2A-AS1P86434 159 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 PRKCZQ05513 592 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 STK4Q13043 487 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 NTRK2Q16620 822 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 PCGF3Q3KNV8 242 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 CXorf66Q5JRM2 361 aaPredicted RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 RAB41Q5JT25 222 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 GGNBP1Q5YKI7 109 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 SIGIRRQ6IA17 410 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 JADE1Q6IE81 842 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 APOBEC3HQ6NTF7 200 aaKnown RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 SEPT14Q6ZU15 432 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 CACNA2D4Q7Z3S7 1137 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 NOXA1Q86UR1 476 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 EPHX4Q8IUS5 362 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 SLC35F3Q8IY50 421 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 CCDC13Q8IYE1 715 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 SCYL3Q8IZE3 742 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 DNAAF4Q8WXU2 420 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 TRIB2Q92519 343 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 HMCESQ96FZ2 354 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 FAM84BQ96KN1 310 aaPredicted RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 APOLD1Q96LR9 279 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 NUDCD1Q96RS6 583 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 SEPT5Q99719 369 aaPredicted RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 PCGF1Q9BSM1 259 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 MSTO1Q9BUK6 570 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 SF3B5Q9BWJ5 86 aaKnown RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 IDI2Q9BXS1 227 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 TMEM39BQ9GZU3 492 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 RBM38Q9H0Z9 239 aaKnown RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 C11orf49Q9H6J7 331 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 HINT3Q9NQE9 182 aaKnown RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 ZBTB40Q9NUA8 1239 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 NKIRAS2Q9NYR9 191 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 CLIC5Q9NZA1 410 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 MRPL15Q9P015 296 aaKnown RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 CNOT8Q9UFF9 292 aaKnown RBP3.76□□□□□ -1.81
HERC1-215ENST00000561436 RCOR1Q9UKL0 485 aa3.76□□□□□ -1.81
HERC1-215ENST00000561436 AGTPBP1Q9UPW5 1226 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms