RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	SLC7A5P2	Q9GIP4	190 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	DNAI2	Q9GZS0	605 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	TNMD	Q9H2S6	317 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	TTYH1	Q9H313	450 aa	Predicted RBP	4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	ECHDC1	Q9NTX5	307 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	TCP11L1	Q9NUJ3	509 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	TMEM184C	Q9NVA4	438 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	PPP1R14D	Q9NXH3	145 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	FLRT1	Q9NZU1	646 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	TBC1D14	Q9P2M4	693 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	PEMT	Q9UBM1	199 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	UBA2	Q9UBT2	640 aa	Predicted RBP	4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	GRID1	Q9ULK0	1009 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	RAP2C	Q9Y3L5	183 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZHX2	Q9Y6X8	837 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	MYH1	P12882	1939 aa		4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	RBBP6	Q7Z6E9	1792 aa	Known RBP	4.16	□□□□□ -1.74
LRRC28-222	ENST00000561431	GREB1L	Q9C091	1923 aa	Predicted RBP	4.15	□□□□□ -1.74
LRRC28-222	ENST00000561431	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	TEX13C	A0A0J9YWL9	993 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	TARSL2	A2RTX5	802 aa	Known RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAM90A7P	A6NKC0	464 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAM90A22P	A8MWA6	464 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAM90A12P	A8MX19	464 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAM90A23P	A8MXZ1	464 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	HNRNPCL2	B2RXH8	293 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	KIF2A	O00139	706 aa	Predicted RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	UBE2C	O00762	179 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	PRKAB2	O43741	272 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	HNRNPCL1	O60812	293 aa	Known RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMCC1	O94876	653 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	STAMBP	O95630	424 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	HEXB	P07686	556 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	SNRNP70	P08621	437 aa	Known RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	CCDC172	P0C7W6	258 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	PRR35	P0CG20	571 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	TOP1	P11387	765 aa	Known RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	PTPN2	P17706	415 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	SHMT1	P34896	483 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	RFC1	P35251	1148 aa	Predicted RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	USP8	P40818	1118 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	RGS2	P41220	211 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	PTPN9	P43378	593 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	MMP13	P45452	471 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	IFNAR2	P48551	515 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	SULT1E1	P49888	294 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	PLCD1	P51178	756 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMPRSS3	P57727	454 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	SP3	Q02447	781 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	SGCG	Q13326	291 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	SYCP1	Q15431	976 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	PPP1R7	Q15435	360 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	ALG11	Q2TAA5	492 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	PLK5	Q496M5	336 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	KIAA1755	Q5JYT7	1200 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	CCDC183	Q5T5S1	534 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	TPGS2	Q68CL5	300 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	AAGAB	Q6PD74	315 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	C17orf99	Q6UX52	265 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	LPCAT2	Q7L5N7	544 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	MTERF4	Q7Z6M4	381 aa	Known RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	CPLX4	Q7Z7G2	160 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	FOXP4	Q8IVH2	680 aa	Predicted RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	DDIAS	Q8IXT1	998 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAM185A	Q8N0U4	392 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	CPXM2	Q8N436	756 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	EXD3	Q8N9H8	876 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	KBTBD3	Q8NAB2	608 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	SETD9	Q8NE22	299 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	CMAS	Q8NFW8	434 aa	Predicted RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	EXOC6	Q8TAG9	804 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	SDR42E1	Q8WUS8	393 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	FAR1	Q8WVX9	515 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	RAB40A	Q8WXH6	277 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	PTP4A1	Q93096	173 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	GIMAP5	Q96F15	307 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	FEM1C	Q96JP0	617 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	CABS1	Q96KC9	395 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	DACH2	Q96NX9	599 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	RBM14	Q96PK6	669 aa	Known RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	TMEM237	Q96Q45	408 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	TEFM	Q96QE5	360 aa	Known RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	SIGLEC11	Q96RL6	698 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	FNBP1	Q96RU3	617 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	ATP6V0B	Q99437	205 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	CITED2	Q99967	270 aa	Predicted RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	PIMREG	Q9BSJ6	248 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	FUZ	Q9BT04	418 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	ACAT2	Q9BWD1	397 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	PHF7	Q9BWX1	381 aa	Predicted RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	CRNKL1	Q9BZJ0	848 aa	Known RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	SLC25A18	Q9H1K4	315 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	CLSTN2	Q9H4D0	955 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	ERVMER34-1	Q9H9K5	563 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	BEX4	Q9NWD9	120 aa	Predicted RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	ADD3	Q9UEY8	706 aa	Known RBP	4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	RPS6KA6	Q9UK32	745 aa		4.15	□□□□□ -1.75
LRRC28-222	ENST00000561431	ICK	Q9UPZ9	632 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms