RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 GTF2H3Q13889 308 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 SEMA3AQ14563 771 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 TRIP6Q15654 476 aaKnown RBP9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 DBN1Q16643 649 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 TYSND1Q2T9J0 566 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 FASTKD1Q53R41 847 aaKnown RBP9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 AARS2Q5JTZ9 985 aaKnown RBP9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 CASC4Q6P4E1 433 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 WASH2PQ6VEQ5 465 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 MARK2Q7KZI7 788 aaKnown RBP9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 TAF8Q7Z7C8 310 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 DEFB124Q8NES8 71 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 GPR156Q8NFN8 814 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 GLMNQ92990 594 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 APOLD1Q96LR9 279 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 CAMK1GQ96NX5 476 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 DPH5Q9H2P9 285 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 ARFGAP3Q9NP61 516 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 WASH6PQ9NQA3 447 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 CATSPERZQ9NTU4 200 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 GULP1Q9UBP9 304 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 SLC23A2Q9UGH3 650 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 DMGDHQ9UI17 866 aaKnown RBP9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 GPSM3Q9Y4H4 160 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 PCDHGA1Q9Y5H4 931 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 U3KQA8 63 aa9.49□□□□□ -0.89
RABGGTA-221ENST00000561055 FFAR2O15552 330 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 NOBOXO60393 691 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 CDK4P11802 303 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 AK4P27144 223 aaPredicted RBP9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 AKT1P31749 480 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 DUSP3P51452 185 aaPredicted RBP9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 CTSCP53634 463 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 ADARP55265 1226 aaKnown RBP9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 ILKQ13418 452 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 TRADDQ15628 312 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 LONRF1Q17RB8 773 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 DEFB133Q30KQ1 61 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 ZNF658BQ4V348 819 aaPredicted RBP9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 SPANXN3Q5MJ09 141 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 AGAP9Q5VTM2 703 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 METRNLQ641Q3 311 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 STEAP4Q687X5 459 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 MRNIPQ6NTE8 343 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 TMEM220Q6QAJ8 160 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 CES3Q6UWW8 571 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 ABRAXAS1Q6UWZ7 409 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 ZDHHC24Q6UX98 284 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 CYS1Q717R9 158 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 CHST15Q7LFX5 561 aaPredicted RBP9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 TAS2R42Q7RTR8 314 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 AMZ2Q86W34 360 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 IGDCC3Q8IVU1 814 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 SLC35F3Q8IY50 421 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 NAGSQ8N159 534 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 ARL10Q8N8L6 244 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 FAM46DQ8NEK8 389 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 OR6C4Q8NGE1 309 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 OR2L2Q8NH16 312 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 FBXO25Q8TCJ0 367 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 ZNF669Q96BR6 464 aaPredicted RBP9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 SGF29Q96ES7 293 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 DCUN1D1Q96GG9 259 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 CNDP2Q96KP4 475 aaKnown RBP9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 WDR83Q9BRX9 315 aaKnown RBP9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 TRIM56Q9BRZ2 755 aaKnown RBP9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 CARD6Q9BX69 1037 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 PLAC1Q9HBJ0 212 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 FAM114A2Q9NRY5 505 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 ZDHHC18Q9NUE0 388 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 SPATS2LQ9NUQ6 558 aaKnown RBP9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 EVA1BQ9NVM1 165 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 TOR4AQ9NXH8 423 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 TAAR2Q9P1P5 351 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 MARCH4Q9P2E8 410 aaPredicted RBP9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 FTSJ1Q9UET6 329 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 DOLKQ9UPQ8 538 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 PRKAB1Q9Y478 270 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 PLEKHM1Q9Y4G2 1056 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 MAD1L1Q9Y6D9 718 aa9.48□□□□□ -0.89
RABGGTA-221ENST00000561055 DCDC2BA2VCK2 349 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 MGAT4DA6NG13 374 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 OR2AG2A6NM03 316 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 OR5K4A6NMS3 321 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 F8W8V4 182 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 POP7O75817 140 aaKnown RBP9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 GP1BAP07359 652 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 ACP5P13686 325 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 F3P13726 295 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 SLC2A4P14672 509 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 PNLIPP16233 465 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 VCLP18206 1134 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 RPS3P23396 243 aaKnown RBP eCLIP9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 ELK3P41970 407 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 ACTR1BP42025 376 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 RPIAP49247 311 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 ACADVLP49748 655 aa9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 NOVA1P51513 510 aaKnown RBP9.47□□□□□ -0.89
RABGGTA-221ENST00000561055 PLTPP55058 493 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms