RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 PTGIRP43119 386 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 PRSS12P56730 875 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 PPP1CAP62136 330 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 ACY1Q03154 408 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 PIGHQ14442 188 aaPredicted RBP10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 PCSK7Q16549 785 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 KYNUQ16719 465 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 QPCTQ16769 361 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 HADHQ16836 314 aaKnown RBP10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 UGT8Q16880 541 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 TXNRD3NBQ6F5E7 133 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 PWWP2BQ6NUJ5 590 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 KLHL35Q6PF15 583 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 MAMDC2Q7Z304 686 aaPredicted RBP10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 ADGRG6Q86SQ4 1221 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 SYVN1Q86TM6 617 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 TEKT4Q8WW24 435 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 GLYATL1Q969I3 302 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 BTBD6Q96KE9 485 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZNF830Q96NB3 372 aaPredicted RBP10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZSCAN5AQ9BUG6 496 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 GPR87Q9BY21 358 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZFYVE1Q9HBF4 777 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 FGF21Q9NSA1 209 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 SOHLH2Q9NX45 425 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 SLC23A2Q9UGH3 650 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 ANAPC7Q9UJX3 599 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 MAP4K5Q9Y4K4 846 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 UNC79Q9P2D8 2635 aa10.3□□□□□ -0.76
CDC42BPB-207ENST00000560492 SPENQ96T58 3664 aaKnown RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 PRRC2CQ9Y520 2896 aaKnown RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 IGHV5-51A0A0C4DH38 117 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 RGSL1A5PLK6 1076 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 ANKRD66B4E2M5 251 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 GPR89AB7ZAQ6 455 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 CPNE3O75131 537 aaKnown RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 SCRG1O75711 98 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 CD48P09326 243 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 GPR89BP0CG08 455 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 GZMAP12544 262 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 FOLR1P15328 257 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 PTMSP20962 102 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 PBLDP30039 288 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 CLCNKAP51800 687 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 NIPAL4Q0D2K0 466 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 GALNT2Q10471 571 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 IL10RAQ13651 578 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 RAPSNQ13702 412 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 ELOAQ14241 798 aaKnown RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 NFKBIBQ15653 356 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 DNTTIP2Q5QJE6 756 aaKnown RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 ARMC6Q6NXE6 501 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZNF571Q7Z3V5 609 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 RBM12BQ8IXT5 1001 aaKnown RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 RAVER1Q8IY67 606 aaKnown RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 KCTD6Q8NC69 237 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 GPR26Q8NDV2 337 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 KLHL6Q8WZ60 621 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 UBXN4Q92575 508 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 ZNF514Q96K75 400 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 TIMM29Q9BSF4 260 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 SLC7A5P2Q9GIP4 190 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 AKIRIN1Q9H9L7 192 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 WASH6PQ9NQA3 447 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 RAD18Q9NS91 495 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 ANO10Q9NW15 660 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 DTLQ9NZJ0 730 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 IP6K2Q9UHH9 426 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 MYO6Q9UM54 1294 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 SNX7Q9UNH6 387 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 PSMD13Q9UNM6 376 aa10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 FARSAQ9Y285 508 aaKnown RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 PCDHGA9Q9Y5G4 932 aaKnown RBP10.29□□□□□ -0.76
CDC42BPB-207ENST00000560492 TCP11X1B4DZS4 312 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 DDX3XO00571 662 aaKnown RBP eCLIP10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 DDX3YO15523 660 aaKnown RBP10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 VEGFDO43915 354 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 SORBS2O94875 1100 aaKnown RBP10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 RECKO95980 971 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 PRLP01236 227 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 JCHAINP01591 159 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 KLK3P07288 261 aaPredicted RBP10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 SKILP12757 684 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 CCNCP24863 283 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 DCTP40126 519 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 IHHQ14623 411 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 NR6A1Q15406 480 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 GPR19Q15760 415 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 TMTC4Q5T4D3 741 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 NCBP2-AS2Q69YL0 99 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 CCDC70Q6NSX1 233 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 JMJD6Q6NYC1 403 aaPredicted RBP10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 CERS6Q6ZMG9 384 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 RHOT1Q8IXI2 618 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 TRAM1L1Q8N609 369 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 ARRDC2Q8TBH0 407 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 MAML1Q92585 1016 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 CLIP3Q96DZ5 547 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 LYSMD1Q96S90 227 aa10.28□□□□□ -0.76
CDC42BPB-207ENST00000560492 MAP3K3Q99759 626 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms