RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 CDK18Q07002 472 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 NIPAL4Q0D2K0 466 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 GPR19Q15760 415 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 QPCTQ16769 361 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 PRAMEF17Q5VTA0 474 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 ALG1LQ6GMV1 187 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 ZNF517Q6ZMY9 492 aaPredicted RBP16.27■□□□□ 0.2
HERC1-207ENST00000560316 LRRTM4Q86VH4 590 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 BPHLQ86WA6 291 aaPredicted RBP16.27■□□□□ 0.2
HERC1-207ENST00000560316 ZNF547Q8IVP9 402 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 RBM12BQ8IXT5 1001 aaKnown RBP16.27■□□□□ 0.2
HERC1-207ENST00000560316 SLC34A3Q8N130 599 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 ARRDC2Q8TBH0 407 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 CCHCR1Q8TD31 782 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 ZNF653Q96CK0 615 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 EID2BQ96D98 161 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 SMAD5Q99717 465 aaKnown RBP16.27■□□□□ 0.2
HERC1-207ENST00000560316 WDR37Q9Y2I8 494 aa16.27■□□□□ 0.2
HERC1-207ENST00000560316 APCP25054 2843 aa16.27■□□□□ 0.19
HERC1-207ENST00000560316 CROCCQ5TZA2 2017 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 RGSL1A5PLK6 1076 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 GPR89AB7ZAQ6 455 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 F5H423 210 aaPredicted RBP16.26■□□□□ 0.19
HERC1-207ENST00000560316 JCHAINP01591 159 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 TPM2P07951 284 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 GPR89BP0CG08 455 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 ATP1A3P13637 1013 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 IDSP22304 550 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 GRNP28799 593 aaKnown RBP16.26■□□□□ 0.19
HERC1-207ENST00000560316 UBE2HP62256 183 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 ELOAQ14241 798 aaKnown RBP16.26■□□□□ 0.19
HERC1-207ENST00000560316 TXNRD3NBQ6F5E7 133 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 ZBTB2Q8N680 514 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 GLIS1Q8NBF1 620 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 GPR26Q8NDV2 337 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 GPR150Q8NGU9 434 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 LRRN4Q8WUT4 740 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 MOCOSQ96EN8 888 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 TIMM29Q9BSF4 260 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 RBM22Q9NW64 420 aaKnown RBP eCLIP16.26■□□□□ 0.19
HERC1-207ENST00000560316 TCFL5Q9UL49 500 aa16.26■□□□□ 0.19
HERC1-207ENST00000560316 PCSK5Q92824 1860 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 HNRNPRO43390 633 aaKnown RBP16.25■□□□□ 0.19
HERC1-207ENST00000560316 KLK3P07288 261 aaPredicted RBP16.25■□□□□ 0.19
HERC1-207ENST00000560316 RARAP10276 462 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 CA4P22748 312 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 FECHP22830 423 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 CES1P23141 567 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 PCK1P35558 622 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 VAV2P52735 878 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 RPL26P61254 145 aaKnown RBP16.25■□□□□ 0.19
HERC1-207ENST00000560316 TUBB4BP68371 445 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 ATP1A4Q13733 1029 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 TUBB2AQ13885 445 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 KHDC1Q4VXA5 237 aaKnown RBP16.25■□□□□ 0.19
HERC1-207ENST00000560316 AGAP9Q5VTM2 703 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 CDKAL1Q5VV42 579 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 WASH2PQ6VEQ5 465 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 MED25Q71SY5 747 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 D2HGDHQ8N465 521 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 TMEM102Q8N9M5 508 aaPredicted RBP16.25■□□□□ 0.19
HERC1-207ENST00000560316 MAML1Q92585 1016 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 GLYATL1Q969I3 302 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 SYT11Q9BT88 431 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 TUBB2BQ9BVA1 445 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 UNKQ9C0B0 810 aaKnown RBP16.25■□□□□ 0.19
HERC1-207ENST00000560316 CLSTN2Q9H4D0 955 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 PCDH18Q9HCL0 1135 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 KCND1Q9NSA2 647 aa16.25■□□□□ 0.19
HERC1-207ENST00000560316 RPL26L1Q9UNX3 145 aaKnown RBP16.25■□□□□ 0.19
HERC1-207ENST00000560316 UBA6A0AVT1 1052 aaPredicted RBP16.24■□□□□ 0.19
HERC1-207ENST00000560316 ANKRD66B4E2M5 251 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 DDX3YO15523 660 aaKnown RBP16.24■□□□□ 0.19
HERC1-207ENST00000560316 MFSD11O43934 449 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 SLC4A1P02730 911 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 HLA-DQB2P05538 268 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 RAB40ALP0C0E4 278 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 ZNF165P49910 485 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 HSD11B2P80365 405 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 MMRN1Q13201 1228 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 NAA30Q147X3 362 aaPredicted RBP16.24■□□□□ 0.19
HERC1-207ENST00000560316 KYNUQ16719 465 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 BOLA3Q53S33 107 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 DNTTIP2Q5QJE6 756 aaKnown RBP16.24■□□□□ 0.19
HERC1-207ENST00000560316 PLEKHS1Q5SXH7 462 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 VWA5B1Q5TIE3 1220 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 KMT5CQ86Y97 462 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 DSELQ8IZU8 1212 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 ZNF501Q96CX3 271 aaPredicted RBP16.24■□□□□ 0.19
HERC1-207ENST00000560316 ZSCAN5AQ9BUG6 496 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 NLNQ9BYT8 704 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 B3GNT3Q9Y2A9 372 aa16.24■□□□□ 0.19
HERC1-207ENST00000560316 F8P00451 2351 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 DIDO1Q9BTC0 2240 aaKnown RBP16.23■□□□□ 0.19
HERC1-207ENST00000560316 TLCD2A6NGC4 264 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 MEN1O00255 615 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 MATN3O15232 486 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 CDK14O94921 469 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 PIRTP0C851 137 aa16.23■□□□□ 0.19
HERC1-207ENST00000560316 FERP16591 822 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms