RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 GPR78Q96P69 363 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 FAM111AQ96PZ2 611 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 ZCCHC2Q9C0B9 1178 aaKnown RBP12.03□□□□□ -0.48
HERC1-205ENST00000559886 SYTL2Q9HCH5 934 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 TMEM216Q9P0N5 145 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 TRMT6Q9UJA5 497 aaKnown RBP12.03□□□□□ -0.48
HERC1-205ENST00000559886 ADAM21Q9UKJ8 722 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 EMCNQ9ULC0 261 aa12.03□□□□□ -0.48
HERC1-205ENST00000559886 IGHV1OR15-9A0A0B4J2B8 117 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 K7ESF4 209 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 QSOX1O00391 747 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 TRIM16O95361 564 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 IGFALSP35858 605 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 MDH1P40925 334 aaKnown RBP12.02□□□□□ -0.48
HERC1-205ENST00000559886 CCR3P51677 355 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 CCR5P51681 352 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 LVRNQ6Q4G3 990 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 ADGRG6Q86SQ4 1221 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 TRIM74Q86UV6 250 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.02□□□□□ -0.48
HERC1-205ENST00000559886 SIDT2Q8NBJ9 832 aaKnown RBP12.02□□□□□ -0.48
HERC1-205ENST00000559886 DENND6BQ8NEG7 585 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 MGARPQ8TDB4 240 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 NXNL1Q96CM4 212 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 TSNARE1Q96NA8 513 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 PANX3Q96QZ0 392 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 UHRF1Q96T88 793 aaPredicted RBP12.02□□□□□ -0.48
HERC1-205ENST00000559886 EPHX3Q9H6B9 360 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 C6orf106Q9H6K1 298 aaPredicted RBP12.02□□□□□ -0.48
HERC1-205ENST00000559886 MLXIPLQ9NP71 852 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 IGSF5Q9NSI5 407 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 KLHL42Q9P2K6 505 aa12.02□□□□□ -0.48
HERC1-205ENST00000559886 RUVBL2Q9Y230 463 aaKnown RBP12.02□□□□□ -0.48
HERC1-205ENST00000559886 CEP192Q8TEP8 1941 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 F8W8V4 182 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 VEGFDO43915 354 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 ASMTLO95671 621 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 LTA4HP09960 611 aaKnown RBP12.02□□□□□ -0.49
HERC1-205ENST00000559886 DHRS4L1P0CG22 281 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 AOC1P19801 751 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 PXNP49023 591 aaPredicted RBP12.02□□□□□ -0.49
HERC1-205ENST00000559886 CSHL1Q14406 222 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 SEPT7Q16181 437 aaKnown RBP12.02□□□□□ -0.49
HERC1-205ENST00000559886 FAM83EQ2M2I3 478 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 TSNAXIP1Q2TAA8 658 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 AGAP9Q5VTM2 703 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 C16orf46Q6P387 395 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 SPATA6LQ8N4H0 392 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 RLN3Q8WXF3 142 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 INPP5DQ92835 1189 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 LGR4Q9BXB1 951 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 WDR26Q9H7D7 661 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 SARS2Q9NP81 518 aaKnown RBP12.02□□□□□ -0.49
HERC1-205ENST00000559886 FZD3Q9NPG1 666 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 SPATS2LQ9NUQ6 558 aaKnown RBP12.02□□□□□ -0.49
HERC1-205ENST00000559886 ATXN10Q9UBB4 475 aa12.02□□□□□ -0.49
HERC1-205ENST00000559886 PLIN3O60664 434 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 MAGEC1O60732 1142 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 CDK14O94921 469 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 PROCP04070 461 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 IGHV4-34P06331 123 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 ITGB6P18564 788 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 CTSCP53634 463 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 GUCY1A3Q02108 690 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 CCDC153Q494R4 210 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 KIAA0895LQ68EN5 471 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 FRMD1Q8N878 549 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 GPR174Q9BXC1 333 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 OR2AG1Q9H205 316 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 NMRAL1Q9HBL8 299 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 OR1A2Q9Y585 309 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 ANKRD12Q6UB98 2062 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 OR2AG2A6NM03 316 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 TSPAN12O95859 305 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 HNRNPA2B1P22626 353 aaKnown RBP12.01□□□□□ -0.49
HERC1-205ENST00000559886 PRLHRP49683 370 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 HHATQ5VTY9 493 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 OTOAQ7RTW8 1153 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 TMEM151AQ8N4L1 468 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 NKAPQ8N5F7 415 aaKnown RBP12.01□□□□□ -0.49
HERC1-205ENST00000559886 FAM160A2Q8N612 972 aaPredicted RBP12.01□□□□□ -0.49
HERC1-205ENST00000559886 ARMC2Q8NEN0 867 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 FUBP1Q96AE4 644 aaKnown RBP12.01□□□□□ -0.49
HERC1-205ENST00000559886 TSSK1BQ9BXA7 367 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 DERL2Q9GZP9 239 aa12.01□□□□□ -0.49
HERC1-205ENST00000559886 PHPT1Q9NRX4 125 aaPredicted RBP12.01□□□□□ -0.49
HERC1-205ENST00000559886 LILRB5O75023 590 aa12□□□□□ -0.49
HERC1-205ENST00000559886 FTH1P02794 183 aa12□□□□□ -0.49
HERC1-205ENST00000559886 MYCLP1P12525 358 aaPredicted RBP12□□□□□ -0.49
HERC1-205ENST00000559886 CD1DP15813 335 aa12□□□□□ -0.49
HERC1-205ENST00000559886 AOAHP28039 575 aa12□□□□□ -0.49
HERC1-205ENST00000559886 CCR7P32248 378 aa12□□□□□ -0.49
HERC1-205ENST00000559886 KPNA2P52292 529 aaKnown RBP12□□□□□ -0.49
HERC1-205ENST00000559886 IL2P60568 153 aa12□□□□□ -0.49
HERC1-205ENST00000559886 ACAP2Q15057 778 aa12□□□□□ -0.49
HERC1-205ENST00000559886 BCL7AQ4VC05 210 aa12□□□□□ -0.49
HERC1-205ENST00000559886 TMEM220Q6QAJ8 160 aa12□□□□□ -0.49
HERC1-205ENST00000559886 CPNE9Q8IYJ1 553 aa12□□□□□ -0.49
HERC1-205ENST00000559886 FSTL5Q8N475 847 aaPredicted RBP12□□□□□ -0.49
HERC1-205ENST00000559886 ZBTB2Q8N680 514 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms