RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 FAM8A1Q9UBU6 413 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 TRMT6Q9UJA5 497 aaKnown RBP10.3□□□□□ -0.76
TPM1-221ENST00000559831 VWA7Q9Y334 891 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 HS3ST3A1Q9Y663 406 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 COMMD10Q9Y6G5 202 aa10.3□□□□□ -0.76
TPM1-221ENST00000559831 ANKRD12Q6UB98 2062 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 F8W8V4 182 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 H3BMM5 538 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 H3BQF6 201 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 VEGFDO43915 354 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 RFPL1O75677 317 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 ALDOAP04075 364 aaKnown RBP10.29□□□□□ -0.76
TPM1-221ENST00000559831 SP9P0CG40 484 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 PYGBP11216 843 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 GMPRP36959 345 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 RABIFP47224 123 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 THOP1P52888 689 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 ADARP55265 1226 aaKnown RBP10.29□□□□□ -0.76
TPM1-221ENST00000559831 KIAA1024LP59773 190 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 RAB10P61026 200 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 MAGOHP61326 146 aaKnown RBP10.29□□□□□ -0.76
TPM1-221ENST00000559831 DNAJC3Q13217 504 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 NFATC4Q14934 902 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 ANGPT1Q15389 498 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 PPM1JQ5JR12 505 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 WDR45BQ5MNZ6 344 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 ENPP7Q6UWV6 458 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 KYAT3Q6YP21 454 aaKnown RBP10.29□□□□□ -0.76
TPM1-221ENST00000559831 MACC1Q6ZN28 852 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 TIFABQ6ZNK6 161 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 Q6ZSR6 202 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 C11orf74Q86VG3 221 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 CEP97Q8IW35 865 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 SIDT2Q8NBJ9 832 aaKnown RBP10.29□□□□□ -0.76
TPM1-221ENST00000559831 OR13H1Q8NG92 308 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 WDR92Q96MX6 357 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 PANX3Q96QZ0 392 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 SMC6Q96SB8 1091 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 ORAI3Q9BRQ5 295 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 TSSK1BQ9BXA7 367 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 DUSP15Q9H1R2 295 aaPredicted RBP10.29□□□□□ -0.76
TPM1-221ENST00000559831 C11orf16Q9NQ32 467 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 TAS2R13Q9NYV9 303 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 GALPQ9UBC7 116 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 TSR3Q9UJK0 312 aaKnown RBP10.29□□□□□ -0.76
TPM1-221ENST00000559831 TLK1Q9UKI8 766 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 PRKAB1Q9Y478 270 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 SLCO1B1Q9Y6L6 691 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 FANCMQ8IYD8 2048 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 ATXN2Q99700 1313 aaKnown RBP10.29□□□□□ -0.76
TPM1-221ENST00000559831 SDK1Q7Z5N4 2213 aa10.29□□□□□ -0.76
TPM1-221ENST00000559831 A0A096LPK6 155 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 TMEM202A6NGA9 273 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 HMGB1P1B2RPK0 211 aaPredicted RBP10.28□□□□□ -0.76
TPM1-221ENST00000559831 QSOX1O00391 747 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 SCAMP1O15126 338 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 HRO43593 1189 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 SGTAO43765 313 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 DNAJC6O75061 913 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 SPAG7O75391 227 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 FTH1P02794 183 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 MPOP05164 745 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 HOXC4P09017 264 aaPredicted RBP10.28□□□□□ -0.76
TPM1-221ENST00000559831 THEGLP0DJG4 465 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 KRT4P19013 534 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 KELP23276 732 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 HTR1BP28222 390 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 CRABP2P29373 138 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 HPDP32754 393 aaPredicted RBP10.28□□□□□ -0.76
TPM1-221ENST00000559831 PRLHRP49683 370 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 PFN3P60673 137 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 YPEL5P62699 121 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 IRF9Q00978 393 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 TIAL1Q01085 375 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM1-221ENST00000559831 PPARDQ03181 441 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 BOP1Q14137 746 aaKnown RBP10.28□□□□□ -0.76
TPM1-221ENST00000559831 TNFAIP8L3Q5GJ75 292 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 TPRG1LQ5T0D9 272 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 LYSMD4Q5XG99 296 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 UGT3A1Q6NUS8 523 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 LAYNQ6UX15 382 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 NAPRTQ6XQN6 538 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 ABI3BPQ7Z7G0 1075 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 EXOC3L1Q86VI1 746 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 CNPY4Q8N129 248 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 ELMO1Q92556 727 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 KCNJ9Q92806 393 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 ISL2Q96A47 359 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 TLCD1Q96CP7 247 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 KLHDC7BQ96G42 594 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 TSNARE1Q96NA8 513 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 SLC30A3Q99726 388 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 SELENOSQ9BQE4 189 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 FAM126AQ9BYI3 521 aaPredicted RBP10.28□□□□□ -0.76
TPM1-221ENST00000559831 GPAMQ9HCL2 828 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 TM9SF3Q9HD45 589 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 MED4Q9NPJ6 270 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 MRPL40Q9NQ50 206 aaKnown RBP10.28□□□□□ -0.76
TPM1-221ENST00000559831 ZSCAN32Q9NX65 697 aa10.28□□□□□ -0.76
TPM1-221ENST00000559831 SENP1Q9P0U3 644 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms