RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 SMOXQ9NWM0 555 aa12.4□□□□□ -0.42
LRRC28-214ENST00000559433 CPNE7Q9UBL6 633 aa12.4□□□□□ -0.42
LRRC28-214ENST00000559433 FEZ2Q9UHY8 353 aaPredicted RBP12.4□□□□□ -0.42
LRRC28-214ENST00000559433 PCDHB11Q9Y5F2 797 aa12.4□□□□□ -0.42
LRRC28-214ENST00000559433 IGHV5-10-1A0A0J9YXX1 117 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 OR5K4A6NMS3 321 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 SRP72O76094 671 aaKnown RBP12.39□□□□□ -0.43
LRRC28-214ENST00000559433 ITIH1P19827 911 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 MSH3P20585 1137 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 SLC5A2P31639 672 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 CSTF2P33240 577 aaKnown RBP eCLIP12.39□□□□□ -0.43
LRRC28-214ENST00000559433 MAPK9P45984 424 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 ZNF140P52738 457 aaPredicted RBP12.39□□□□□ -0.43
LRRC28-214ENST00000559433 LIMK2P53671 638 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 MAPK10P53779 464 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 TMPRSS15P98073 1019 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 SNX1Q13596 522 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 C16orf72Q14CZ0 275 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 KCTD11Q693B1 232 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 ZNF574Q6ZN55 896 aaPredicted RBP12.39□□□□□ -0.43
LRRC28-214ENST00000559433 TRIM48Q8IWZ4 208 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 KLHDC8BQ8IXV7 354 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 RASGEF1AQ8N9B8 481 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 RCBTB1Q8NDN9 531 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 OR4D9Q8NGE8 314 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 OR13C4Q8NGS5 318 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 ZNF398Q8TD17 642 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 C1orf54Q8WWF1 131 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 RTP4Q96DX8 246 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.39□□□□□ -0.43
LRRC28-214ENST00000559433 ARNT2Q9HBZ2 717 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 SCHIP1Q9P0W5 487 aaPredicted RBP12.39□□□□□ -0.43
LRRC28-214ENST00000559433 ZNF148Q9UQR1 794 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 PTPRQQ9UMZ3 2332 aa12.39□□□□□ -0.43
LRRC28-214ENST00000559433 OR2AG2A6NM03 316 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 HGSO14964 777 aaPredicted RBP12.38□□□□□ -0.43
LRRC28-214ENST00000559433 PSMD3O43242 534 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 AP2A1O95782 977 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 IFNB1P01574 187 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
LRRC28-214ENST00000559433 TPH1P17752 444 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 IDSP22304 550 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 MPSTP25325 297 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 RPL10P27635 214 aaKnown RBP12.38□□□□□ -0.43
LRRC28-214ENST00000559433 PBLDP30039 288 aaPredicted RBP12.38□□□□□ -0.43
LRRC28-214ENST00000559433 HADHAP40939 763 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 CTSCP53634 463 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 EPHA4P54764 986 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 DRG2P55039 364 aaKnown RBP12.38□□□□□ -0.43
LRRC28-214ENST00000559433 UBE2IP63279 158 aaKnown RBP12.38□□□□□ -0.43
LRRC28-214ENST00000559433 CFHR1Q03591 330 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 MSLNQ13421 630 aaPredicted RBP12.38□□□□□ -0.43
LRRC28-214ENST00000559433 SQSTM1Q13501 440 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 TRA2AQ13595 282 aaKnown RBP eCLIP12.38□□□□□ -0.43
LRRC28-214ENST00000559433 SEPT6Q14141 434 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 OASLQ15646 514 aaKnown RBP12.38□□□□□ -0.43
LRRC28-214ENST00000559433 ARHGAP40Q5TG30 622 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 TMEM220Q6QAJ8 160 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 DET1Q7L5Y6 550 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 C11orf96Q7Z7L8 435 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 AMZ2Q86W34 360 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 NCSTNQ92542 709 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 UBL7Q96S82 380 aaPredicted RBP12.38□□□□□ -0.43
LRRC28-214ENST00000559433 PRORYQ9H606 182 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 ASB8Q9H765 288 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 PIH1D1Q9NWS0 290 aaKnown RBP12.38□□□□□ -0.43
LRRC28-214ENST00000559433 TMEM9Q9P0T7 183 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 CRLS1Q9UJA2 301 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 PPP2R2CQ9Y2T4 447 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 PCDHGA7Q9Y5G6 932 aa12.38□□□□□ -0.43
LRRC28-214ENST00000559433 TEX51A0A1B0GUA7 166 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 PRR19A6NJB7 356 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 CCL22O00626 93 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 NVLO15381 856 aaKnown RBP12.37□□□□□ -0.43
LRRC28-214ENST00000559433 LDB2O43679 373 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 VIPP01282 170 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 THRAP10827 490 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 XRCC1P18887 633 aaPredicted RBP12.37□□□□□ -0.43
LRRC28-214ENST00000559433 ITGALP20701 1170 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 STIP1P31948 543 aaKnown RBP12.37□□□□□ -0.43
LRRC28-214ENST00000559433 ETV5P41161 510 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 LMAN1P49257 510 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 XIAPP98170 497 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 POU6F1Q14863 301 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 LONRF2Q1L5Z9 754 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 SNAP47Q5SQN1 464 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 FNBP1LQ5T0N5 605 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 AGAP9Q5VTM2 703 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 TMEM71Q6P5X7 295 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 CCDC81Q6ZN84 652 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 AGBL5Q8NDL9 886 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 TRIM58Q8NG06 486 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 USP7Q93009 1102 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 ULK4Q96C45 1275 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 CXorf40BQ96DE9 158 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 DCUN1D1Q96GG9 259 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 ZNF514Q96K75 400 aaPredicted RBP12.37□□□□□ -0.43
LRRC28-214ENST00000559433 DNAJC1Q96KC8 554 aaKnown RBP12.37□□□□□ -0.43
LRRC28-214ENST00000559433 C19orf43Q9BQ61 176 aa12.37□□□□□ -0.43
LRRC28-214ENST00000559433 TBC1D10AQ9BXI6 508 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms