RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 TIMM29Q9BSF4 260 aa21.37■■□□□ 1.01
SNX1-206ENST00000559389 GSDMCQ9BYG8 508 aa21.37■■□□□ 1.01
SNX1-206ENST00000559389 NLGN3Q9NZ94 848 aa21.37■■□□□ 1.01
SNX1-206ENST00000559389 GPR34Q9UPC5 381 aa21.37■■□□□ 1.01
SNX1-206ENST00000559389 BTBD3Q9Y2F9 522 aa21.37■■□□□ 1.01
SNX1-206ENST00000559389 PLEKHM1Q9Y4G2 1056 aa21.37■■□□□ 1.01
SNX1-206ENST00000559389 NEMP2A6NFY4 417 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 TPP1O14773 563 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 FFAR2O15552 330 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 OR1I1O60431 355 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 AP2A2O94973 939 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 AK4P27144 223 aaPredicted RBP21.36■■□□□ 1.01
SNX1-206ENST00000559389 TUBB4BP68371 445 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 PLA2G4EQ3MJ16 856 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 TRMT10BQ6PF06 316 aaKnown RBP21.36■■□□□ 1.01
SNX1-206ENST00000559389 TMEM220Q6QAJ8 160 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 CEP128Q6ZU80 1094 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 CHST15Q7LFX5 561 aaPredicted RBP21.36■■□□□ 1.01
SNX1-206ENST00000559389 GKN2Q86XP6 184 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 OR4C6Q8NH72 309 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 SCG3Q8WXD2 468 aaKnown RBP21.36■■□□□ 1.01
SNX1-206ENST00000559389 SGF29Q96ES7 293 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 C9orf72Q96LT7 481 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 TCF12Q99081 682 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 NFU1Q9UMS0 254 aa21.36■■□□□ 1.01
SNX1-206ENST00000559389 TDRD6O60522 2096 aaKnown RBP21.36■■□□□ 1.01
SNX1-206ENST00000559389 PRR19A6NJB7 356 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 SLC30A4O14863 429 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 ANXA6P08133 673 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 ERVK-10P10266 1014 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 ZNF7P17097 686 aaPredicted RBP21.35■■□□□ 1.01
SNX1-206ENST00000559389 PMLP29590 882 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 SLC1A2P43004 574 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 MAGEA4P43358 317 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 INSCQ1MX18 579 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 DEFB133Q30KQ1 61 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 HSP90AA5PQ58FG0 334 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 LVRNQ6Q4G3 990 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 TAF8Q7Z7C8 310 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 SDCCAG8Q86SQ7 713 aaPredicted RBP21.35■■□□□ 1.01
SNX1-206ENST00000559389 PIP4P1Q86T03 277 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 RELL1Q8IUW5 271 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 DENND6AQ8IWF6 608 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 CNTN4Q8IWV2 1026 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 CLDN19Q8N6F1 224 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 BEND7Q8N7W2 519 aaPredicted RBP21.35■■□□□ 1.01
SNX1-206ENST00000559389 LPGAT1Q92604 370 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 LINC00615Q96LM1 132 aaPredicted RBP21.35■■□□□ 1.01
SNX1-206ENST00000559389 TSPYL1Q9H0U9 437 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 SLC23A2Q9UGH3 650 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 CDV3Q9UKY7 258 aaKnown RBP21.35■■□□□ 1.01
SNX1-206ENST00000559389 KCNK6Q9Y257 313 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 PRSS21Q9Y6M0 314 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 KNL1Q8NG31 2342 aa21.35■■□□□ 1.01
SNX1-206ENST00000559389 RIF1Q5UIP0 2472 aaKnown RBP21.34■■□□□ 1.01
SNX1-206ENST00000559389 QSOX1O00391 747 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 TRIM38O00635 465 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 YY2O15391 372 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 NDUFS3O75489 264 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 GSTA2P09210 222 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 ALPPL2P10696 532 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 SSTR1P30872 391 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 ACTR1BP42025 376 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 CLCNKAP51800 687 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 ACTR1AP61163 376 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 SLC30A9Q6PML9 568 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 EID2Q8N6I1 236 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 EIF1ADQ8N9N8 165 aaKnown RBP21.34■■□□□ 1.01
SNX1-206ENST00000559389 BAHD1Q8TBE0 780 aaPredicted RBP21.34■■□□□ 1.01
SNX1-206ENST00000559389 DUSP23Q9BVJ7 150 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 P2RY12Q9H244 342 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 ANKZF1Q9H8Y5 726 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 IARS2Q9NSE4 1012 aaKnown RBP21.34■■□□□ 1.01
SNX1-206ENST00000559389 INTS10Q9NVR2 710 aaKnown RBP21.34■■□□□ 1.01
SNX1-206ENST00000559389 MOCS1Q9NZB8 636 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 FBXO5Q9UKT4 447 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 DOLKQ9UPQ8 538 aa21.34■■□□□ 1.01
SNX1-206ENST00000559389 DNMT3AQ9Y6K1 912 aaPredicted RBP21.34■■□□□ 1.01
SNX1-206ENST00000559389 PRMT5O14744 637 aaPredicted RBP21.33■■□□□ 1.01
SNX1-206ENST00000559389 PFDN6O15212 129 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 SH3BP5O60239 455 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 POP7O75817 140 aaKnown RBP21.33■■□□□ 1.01
SNX1-206ENST00000559389 RPS3P23396 243 aaKnown RBP eCLIP21.33■■□□□ 1.01
SNX1-206ENST00000559389 TNFRSF8P28908 595 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 HOXD11P31277 338 aaPredicted RBP21.33■■□□□ 1.01
SNX1-206ENST00000559389 GPX6P59796 221 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 DMPKQ09013 629 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 CTBP1Q13363 440 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 C6orf132Q5T0Z8 1188 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 CAPN12Q6ZSI9 719 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 LRRC6Q86X45 466 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 PALM2Q8IXS6 379 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 GABPB2Q8TAK5 448 aaPredicted RBP21.33■■□□□ 1.01
SNX1-206ENST00000559389 SETD7Q8WTS6 366 aaKnown RBP21.33■■□□□ 1.01
SNX1-206ENST00000559389 KLC4Q9NSK0 619 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 TAAR2Q9P1P5 351 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 PCOLCE2Q9UKZ9 415 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 VPS9D1Q9Y2B5 631 aa21.33■■□□□ 1.01
SNX1-206ENST00000559389 BPTFQ12830 3046 aa21.33■■□□□ 1
SNX1-206ENST00000559389 ZFC3H1O60293 1989 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms