RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 ACSS3Q9H6R3 686 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 PDFQ9HBH1 243 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 GPAMQ9HCL2 828 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 VCX3AQ9NNX9 186 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 THSD1Q9NS62 852 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 PARVAQ9NVD7 372 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 NMRK1Q9NWW6 199 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 NDUFA13Q9P0J0 144 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 SPASTQ9UBP0 616 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 DKK3Q9UBP4 350 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 APOBEC3BQ9UH17 382 aaKnown RBP5.85□□□□□ -1.47
USP3-212ENST00000559276 HAO1Q9UJM8 370 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 PADI4Q9UM07 663 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 COQ6Q9Y2Z9 468 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 MYO18BQ8IUG5 2567 aa5.85□□□□□ -1.47
USP3-212ENST00000559276 UBR5O95071 2799 aaPredicted RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 PIEZO2Q9H5I5 2752 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 IQANK1A0A1B0GTG1 560 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 DPPA5A6NC42 116 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 A8MUI8 341 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 WASH4PA8MWX3 477 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 E7ESA3 106 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 J3KR12 359 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 NEMP1O14524 444 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 GYG2O15488 501 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 FKBP6O75344 327 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 TM7SF2O76062 418 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 PIGNO95427 931 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 PSMG1O95456 288 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 PRKCGP05129 697 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 CALB1P05937 261 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 DHRS4L1P0CG22 281 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 PIM1P11309 404 aaPredicted RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 HGFP14210 728 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 CREB1P16220 341 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 GCAP28676 217 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 EPHB2P29323 1055 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 SDC4P31431 198 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 ETFBP38117 255 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 PEX19P40855 299 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 MLLT3P42568 568 aaPredicted RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 RPS6KA3P51812 740 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 HK3P52790 923 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 THOP1P52888 689 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 UCNP55089 124 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 RPL7AP62424 266 aaKnown RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 CCL7P80098 99 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 CDK16Q00536 496 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 RALGDSQ12967 914 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 SNX1Q13596 522 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 CUL3Q13618 768 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 INPP5AQ14642 412 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 TCEA2Q15560 299 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 TGIF1Q15583 401 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 HIF1AQ16665 826 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 P3H1Q32P28 736 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 ARL13BQ3SXY8 428 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 LINC00303Q3SY05 128 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 TAF1BQ53T94 588 aaPredicted RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 INO80DQ53TQ3 878 aaPredicted RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 RNASEH2BQ5TBB1 312 aaKnown RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 OR52E8Q6IFG1 317 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 TMEM154Q6P9G4 183 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 LRRC74BQ6ZQY2 392 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 FAM47EQ6ZV65 393 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 CYP4V2Q6ZWL3 525 aaPredicted RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 GSTA5Q7RTV2 222 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 OTOAQ7RTW8 1153 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 TMPRSS9Q7Z410 1059 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 NET1Q7Z628 596 aaPredicted RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 PPIL6Q8IXY8 311 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 ALDH16A1Q8IZ83 802 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 CYP4X1Q8N118 509 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 UMODL1-AS1Q8N2C9 162 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 PELI3Q8N2H9 469 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 ARFGAP1Q8N6T3 406 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 NIPA2Q8N8Q9 360 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 RTL3Q8N8U3 475 aaKnown RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 EXD3Q8N9H8 876 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 PLA2G15Q8NCC3 412 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 WDR36Q8NI36 951 aaKnown RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 PCDH19Q8TAB3 1148 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 BTN2A2Q8WVV5 523 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 LZICQ8WZA0 190 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 NCSTNQ92542 709 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 JADE3Q92613 823 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 TSACCQ96A04 125 aaPredicted RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 CCDC74AQ96AQ1 378 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 LIN37Q96GY3 246 aaPredicted RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 EXOC2Q96KP1 924 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 C7orf26Q96N11 449 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 CENPKQ9BS16 269 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 CPEB1Q9BZB8 566 aaKnown RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 TRIM4Q9C037 500 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 YIPF3Q9GZM5 350 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 C1orf21Q9H246 121 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 EPB41L1Q9H4G0 881 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 SUDS3Q9H7L9 328 aaPredicted RBP5.84□□□□□ -1.47
USP3-212ENST00000559276 SAYSD1Q9NPB0 183 aa5.84□□□□□ -1.47
USP3-212ENST00000559276 PCDH12Q9NPG4 1184 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms