RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 PCDHGB2Q9Y5G2 931 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 PSAT1Q9Y617 370 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 SPEGQ15772 3267 aa10.74□□□□□ -0.69
TPM1-217ENST00000559108 PCNX2A6NKB5 2137 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 RP1P56715 2156 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 PRAMEF33A0A0G2JMD5 474 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 CXorf49A8MYA2 514 aaPredicted RBP10.73□□□□□ -0.69
TPM1-217ENST00000559108 LMO7DNF2Z398 122 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 SMAPO00193 183 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 SLC30A4O14863 429 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 SIGLEC6O43699 453 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 VEGFDO43915 354 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 NOBOXO60393 691 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 S1PR4O95977 384 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 PBLDP30039 288 aaPredicted RBP10.73□□□□□ -0.69
TPM1-217ENST00000559108 AKT1P31749 480 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 PRLHRP49683 370 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 ATXN3P54252 364 aaPredicted RBP10.73□□□□□ -0.69
TPM1-217ENST00000559108 TIAL1Q01085 375 aaKnown RBP eCLIP10.73□□□□□ -0.69
TPM1-217ENST00000559108 EFTUD2Q15029 972 aaKnown RBP eCLIP10.73□□□□□ -0.69
TPM1-217ENST00000559108 LONRF1Q17RB8 773 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 RSPO4Q2I0M5 234 aaPredicted RBP10.73□□□□□ -0.69
TPM1-217ENST00000559108 PROX2Q3B8N5 592 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 BCL7AQ4VC05 210 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 FASTKD1Q53R41 847 aaKnown RBP10.73□□□□□ -0.69
TPM1-217ENST00000559108 SPANXN3Q5MJ09 141 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 ZNF470Q6ECI4 717 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 NEPROQ6NW34 567 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 ZNF549Q6P9A3 640 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 SLC30A9Q6PML9 568 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 PACS1Q6VY07 963 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 KCNMB4Q86W47 210 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 CCDC25Q86WR0 208 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 GALNT13Q8IUC8 556 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 CILP2Q8IUL8 1156 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 TRAPPC5Q8IUR0 188 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 SLC35F3Q8IY50 421 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 KRT222Q8N1A0 295 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 KYQ8NBH2 561 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.73□□□□□ -0.69
TPM1-217ENST00000559108 ACVR1CQ8NER5 493 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 DEFB124Q8NES8 71 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 GPR150Q8NGU9 434 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 NETO1Q8TDF5 533 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 ULK4Q96C45 1275 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 CERS2Q96G23 380 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 BIRC8Q96P09 236 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 COPS8Q99627 209 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 TXLNGYQ9BZA5 131 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 SLC13A1Q9BZW2 595 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 FBXO6Q9NRD1 293 aaPredicted RBP10.73□□□□□ -0.69
TPM1-217ENST00000559108 FAM114A2Q9NRY5 505 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 C20orf96Q9NUD7 363 aaPredicted RBP10.73□□□□□ -0.69
TPM1-217ENST00000559108 TRNAU1APQ9NX07 287 aaKnown RBP10.73□□□□□ -0.69
TPM1-217ENST00000559108 TOR4AQ9NXH8 423 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 MOCS1Q9NZB8 636 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 NINJ2Q9NZG7 142 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 SPASTQ9UBP0 616 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 FAM8A1Q9UBU6 413 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 TBC1D29Q9UFV1 150 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 PCOLCE2Q9UKZ9 415 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 WDR37Q9Y2I8 494 aa10.73□□□□□ -0.69
TPM1-217ENST00000559108 GOLGA4Q13439 2230 aaKnown RBP10.73□□□□□ -0.69
TPM1-217ENST00000559108 MAGEB16A2A368 324 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 H3BM21 787 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 DFNA5O60443 496 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 NIPSNAP2O75323 286 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 POP7O75817 140 aaKnown RBP10.72□□□□□ -0.69
TPM1-217ENST00000559108 SLU7O95391 586 aaKnown RBP10.72□□□□□ -0.69
TPM1-217ENST00000559108 POLBP06746 335 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 ATP1B2P14415 290 aaPredicted RBP10.72□□□□□ -0.69
TPM1-217ENST00000559108 BRAFP15056 766 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 ZNF7P17097 686 aaPredicted RBP10.72□□□□□ -0.69
TPM1-217ENST00000559108 ITGB6P18564 788 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 MSH3P20585 1137 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 MAGEA4P43358 317 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 MAZP56270 477 aaKnown RBP10.72□□□□□ -0.69
TPM1-217ENST00000559108 CAV1Q03135 178 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 DNAJC3Q13217 504 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 LAMB3Q13751 1172 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 NFE2L1Q14494 772 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 ITIH4Q14624 930 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 ARMC3Q5W041 872 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 CNSTQ6PJW8 725 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 LRRTM4Q86VH4 590 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 CNTN4Q8IWV2 1026 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 NAGSQ8N159 534 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 GPR161Q8N6U8 529 aaKnown RBP10.72□□□□□ -0.69
TPM1-217ENST00000559108 OR4C6Q8NH72 309 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 GIMAP7Q8NHV1 300 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 LRRC39Q96DD0 335 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 SLC30A3Q99726 388 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 NRTNQ99748 197 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 MCMBPQ9BTE3 642 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 EPB41L4BQ9H329 900 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 RMI1Q9H9A7 625 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 LRRC4CQ9HCJ2 640 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 PRDM8Q9NQV8 689 aa10.72□□□□□ -0.69
TPM1-217ENST00000559108 IARS2Q9NSE4 1012 aaKnown RBP10.72□□□□□ -0.69
TPM1-217ENST00000559108 KLC4Q9NSK0 619 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms