RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 PACS1Q6VY07 963 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 NLRP9Q7RTR0 991 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 TAF8Q7Z7C8 310 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 LRRTM4Q86VH4 590 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 CLDN19Q8N6F1 224 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 ARL10Q8N8L6 244 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 OR4L1Q8NH43 312 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 KIF18AQ8NI77 898 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 ZNF669Q96BR6 464 aaPredicted RBP11.26□□□□□ -0.61
SNX1-204ENST00000559061 ULK4Q96C45 1275 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 TIMM29Q9BSF4 260 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 L2HGDHQ9H9P8 463 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 ZDHHC18Q9NUE0 388 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 SLC17A6Q9P2U8 582 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 DMGDHQ9UI17 866 aaKnown RBP11.26□□□□□ -0.61
SNX1-204ENST00000559061 GPR34Q9UPC5 381 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 WDR37Q9Y2I8 494 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 TEX264Q9Y6I9 313 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 SLC30A1Q9Y6M5 507 aa11.26□□□□□ -0.61
SNX1-204ENST00000559061 PRAMEF33A0A0G2JMD5 474 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 EME2A4GXA9 379 aaPredicted RBP11.25□□□□□ -0.61
SNX1-204ENST00000559061 NEMP2A6NFY4 417 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 AP3B1O00203 1094 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 ZNF500O60304 480 aaPredicted RBP11.25□□□□□ -0.61
SNX1-204ENST00000559061 USP1O94782 785 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 VAPBO95292 243 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 C1QAP02745 245 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 CKMT2P17540 419 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 ELK3P41970 407 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 ILF3Q12906 894 aaKnown RBP eCLIP11.25□□□□□ -0.617e-7■■■■□ 23.2
SNX1-204ENST00000559061 LRP8Q14114 963 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 NFE2L1Q14494 772 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 CRYMQ14894 314 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 ARMC3Q5W041 872 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 STEAP4Q687X5 459 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 CENPUQ71F23 418 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 DGLUCYQ7Z3D6 616 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 ZNF438Q7Z4V0 828 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 PCGF5Q86SE9 256 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 GKN2Q86XP6 184 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 MARCH9Q86YJ5 346 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 TRAPPC5Q8IUR0 188 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 SDR16C5Q8N3Y7 309 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 FAM46DQ8NEK8 389 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 GDAP1Q8TB36 358 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 ZDHHC1Q8WTX9 485 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 ART4Q93070 314 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 STAMBPL1Q96FJ0 436 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 LINC00615Q96LM1 132 aaPredicted RBP11.25□□□□□ -0.61
SNX1-204ENST00000559061 COPS8Q99627 209 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 CDC6Q99741 560 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 EBNA1BP2Q99848 306 aaKnown RBP11.25□□□□□ -0.61
SNX1-204ENST00000559061 DUSP23Q9BVJ7 150 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 CARD6Q9BX69 1037 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 GSDMCQ9BYG8 508 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 P2RY12Q9H244 342 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 PRDM8Q9NQV8 689 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 KLC4Q9NSK0 619 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 WHRNQ9P202 907 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 DNAJC16Q9Y2G8 782 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 RNF215Q9Y6U7 377 aa11.25□□□□□ -0.61
SNX1-204ENST00000559061 WDFY3Q8IZQ1 3526 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 HAX1O00165 279 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 KMOO15229 486 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 CD3EAPO15446 510 aaKnown RBP11.24□□□□□ -0.61
SNX1-204ENST00000559061 POP7O75817 140 aaKnown RBP11.24□□□□□ -0.61
SNX1-204ENST00000559061 ATP1B2P14415 290 aaPredicted RBP11.24□□□□□ -0.61
SNX1-204ENST00000559061 PGAM1P18669 254 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 MSH3P20585 1137 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 PBLDP30039 288 aaPredicted RBP11.24□□□□□ -0.61
SNX1-204ENST00000559061 AKT1P31749 480 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 PDX1P52945 283 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 UBE2IP63279 158 aaKnown RBP11.24□□□□□ -0.61
SNX1-204ENST00000559061 PRAMEP78395 509 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 SARNPP82979 210 aaKnown RBP11.24□□□□□ -0.61
SNX1-204ENST00000559061 LAMB3Q13751 1172 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 ITIH4Q14624 930 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 CLCA4Q14CN2 919 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 NR0B2Q15466 257 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 INAVAQ3KP66 663 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 BBS9Q3SYG4 887 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 C14orf28Q4W4Y0 310 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 CTSL3PQ5NE16 218 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 TRMT10BQ6PF06 316 aaKnown RBP11.24□□□□□ -0.61
SNX1-204ENST00000559061 UNC5AQ6ZN44 842 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 TAS2R42Q7RTR8 314 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 RAB44Q7Z6P3 723 aaPredicted RBP11.24□□□□□ -0.61
SNX1-204ENST00000559061 DENND6AQ8IWF6 608 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 SFRP1Q8N474 314 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 GPR150Q8NGU9 434 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 OR6P1Q8NGX9 317 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 FBXO25Q8TCJ0 367 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 SLC37A2Q8TED4 501 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 LPGAT1Q92604 370 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 BIRC8Q96P09 236 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 SLC32A1Q9H598 525 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 CATSPERZQ9NTU4 200 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 ZNF624Q9P2J8 865 aaPredicted RBP11.24□□□□□ -0.61
SNX1-204ENST00000559061 ANAPC5Q9UJX4 755 aa11.24□□□□□ -0.61
SNX1-204ENST00000559061 CHMP2BQ9UQN3 213 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms