RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	ZFYVE27	Q5T4F4	411 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	ZNF648	Q5T619	568 aa	Predicted RBP	6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	PAOX	Q6QHF9	649 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	PIM3	Q86V86	326 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	C17orf82	Q86X59	251 aa	Predicted RBP	6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	NAGS	Q8N159	534 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	CNTD1	Q8N815	330 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	EXD3	Q8N9H8	876 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	LSM14A	Q8ND56	463 aa	Known RBP	6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	CCNY	Q8ND76	341 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	LPCAT1	Q8NF37	534 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	KIAA1524	Q8TCG1	905 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	MAML1	Q92585	1016 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	OR2M4	Q96R27	311 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	WDR24	Q96S15	920 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	BAG1	Q99933	345 aa	Predicted RBP	6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	POLR1E	Q9GZS1	481 aa	Known RBP	6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	BRD8	Q9H0E9	1235 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	ARFGAP3	Q9NP61	516 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	TRNAU1AP	Q9NX07	287 aa	Known RBP	6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	DTL	Q9NZJ0	730 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	ZNHIT2	Q9UHR6	403 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	CNOT6	Q9ULM6	557 aa	Known RBP	6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	PPIL1	Q9Y3C6	166 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	HYOU1	Q9Y4L1	999 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	PCDHGA7	Q9Y5G6	932 aa		6.94	□□□□□ -1.3
MARK3-215	ENST00000558787	IGHV5-10-1	A0A0J9YXX1	117 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	SSU72P8	A0A1W2PR75	194 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	CAPN8	A6NHC0	703 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787		A8MU76	341 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	FADS2P1	A8MWK0	482 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	PSMD11	O00231	422 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	NVL	O15381	856 aa	Known RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	TIAF1	O95411	115 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	CPNE6	O95741	557 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	MMP2	P08253	660 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	PIRT	P0C851	137 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	FGF3	P11487	239 aa	Predicted RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	TNNT1	P13805	278 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	PNLIP	P16233	465 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	KDELR1	P24390	212 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	CCNC	P24863	283 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	TEAD1	P28347	426 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	CSF2RB	P32927	897 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	CD86	P42081	329 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	PPM1F	P49593	454 aa	Predicted RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	DPT	Q07507	201 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	ZBTB17	Q13105	803 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	EIF3I	Q13347	325 aa	Known RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	GALNT3	Q14435	633 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	PDK2	Q15119	407 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	LLGL1	Q15334	1064 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	IFI16	Q16666	785 aa	Known RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	PYCR3	Q53H96	274 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	RALGPS1	Q5JS13	557 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	SNAP47	Q5SQN1	464 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	NPNT	Q6UXI9	565 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	CHST15	Q7LFX5	561 aa	Predicted RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	LRRC49	Q8IUZ0	686 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	LRRC8A	Q8IWT6	810 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	CCDC170	Q8IYT3	715 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	EXD1	Q8NHP7	514 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	SNRNP27	Q8WVK2	155 aa	Known RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	EXTL1	Q92935	676 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	EID2B	Q96D98	161 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	TRIM44	Q96DX7	344 aa	Predicted RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	RNF31	Q96EP0	1072 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	COX14	Q96I36	57 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	CCDC74B	Q96LY2	380 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	TSGA13	Q96PP4	275 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	RNF157	Q96PX1	679 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	CHP1	Q99653	195 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	CMKLR1	Q99788	373 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	YIPF2	Q9BWQ6	316 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	TDRD1	Q9BXT4	1180 aa	Known RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	PCDH9	Q9HC56	1237 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	ASH1L	Q9NR48	2969 aa	Known RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	LATS2	Q9NRM7	1088 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	SPTLC3	Q9NUV7	552 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	RCOR3	Q9P2K3	495 aa	Predicted RBP	6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	HEY1	Q9Y5J3	304 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	SPTA1	P02549	2419 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	COL6A6	A6NMZ7	2263 aa		6.93	□□□□□ -1.3
MARK3-215	ENST00000558787	BOD1L1	Q8NFC6	3051 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	SCN8A	Q9UQD0	1980 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	IGHV1OR21-1	A0A087WYE8	117 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	C1orf232	A0A0U1RR37	186 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	LRRD1	A4D1F6	860 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	C3orf70	A6NLC5	250 aa	Predicted RBP	6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	ARHGAP6	O43182	974 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	SNX2	O60749	519 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	DLGAP3	O95886	979 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	SLC4A1	P02730	911 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	KRT7	P08729	469 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	H2AFZ	P0C0S5	128 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	LIPC	P11150	499 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	DRD2	P14416	443 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	NFKBIA	P25963	317 aa		6.92	□□□□□ -1.3
MARK3-215	ENST00000558787	CYLC1	P35663	651 aa	Predicted RBP	6.92	□□□□□ -1.3

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